KEGG   Tachysurus fulvidraco (yellow catfish): 113662451
Entry
113662451         CDS       T08119                                 
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
  KO
K20775  BRCA1-A complex subunit RAP80
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    113662451 (uimc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113662451 (uimc1)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     113662451 (uimc1)
SSDB
Motif
Pfam: RAP80_UIM UIM ICAM1_3_5_D2
Other DBs
NCBI-GeneID: 113662451
NCBI-ProteinID: XP_047661496
LinkDB
Position
21:complement(2025655..2043017)
AA seq 952 aa
MPRRKRSTVRSERRRKVCRRDNNNDQEEEEEEEDNTLVISDSDSDEEEEDSAKKVSLRAA
RRLEREKKEHVQDMTEEEMLDLALRLSKQEANCATQREQVEDDDMRKAMAESLQSVGCSQ
ASETSFKRVRSAPKPHQDRDAVSAHVRCKLSFSSKDKKAGVSIDDVPNAQASALKSSEED
GALLPMPDLSQGTLSRPSPPSPTLPSVPSADSQESCSSRLAKQEFDAHRPEDASSQSDAP
LEGSPVFLRHCSVRLNQNVLSSSRSFRISSHTTNSALGSTSPNPKSQSSPLPPKSPVFPK
TDLKRCTQLTRGKFSDSHSSRSDGVRKPEDAFQESSSRKCRDSPKRLSRGKKAPSSSRAS
APEDDSQEAGKVKEQAKEESSRGTGLRTVSDRAPTLDTSSPADGCPTDGLISHMVLLLSD
DDDDDDDDDKIIHPSPVFPQGRASCAGKPKLSPTQLCPSSPSAITTPDSNHTKSSSQVQS
EQPNVSRKSSDSRLSSAAEGKDIGVVSYFWGIPFCPKGQSPDDYTRVILTQLEVYEKSLK
EAQRRLLHKADWGLPVFPCPVERPHGRRLKRHRAPRLLDEDEEEEQEEDEEKEEVQGRDE
EEKEKKKKVERKKREDSQSCSEEGAQNGQHETYVVVSSPETQEELGQKSPLMLGQKESTN
PAKPSSCRKLIPQDLSEDTQIQSEPDELGEEVQDGSFDMEGAVCPETQMTPELMVTSPAQ
SNADGMEVDEVTESPPEADLGERMEQERPGEEPSWMESVPSQVECPMCTRLFPLSKIEVH
AAYCNGAVEEQVQEQQDNLSQASARRKITRRTTEDDVTFEKSEQREKCFLCKKFFTTKEY
RHHVDQCIQQKALGPKQGNGLLSALNRTETVHLDDSRAGPSNTTARNSRSLADTSVTPGD
SSDSQASGYYVSSSPIKSFTPISEITDCLINFRQQYSDRTSQRLGRKRKFKR
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgcctcggagaaaaaggagcacagtgcggagtgagagacggagaaaagtttgtcggaga
gacaacaataacgaccaggaggaagaggaagaggaggaggataacacattggttatctct
gactctgatagtgatgaagaggaagaagacagtgccaagaaagtgagtctgagagcagcg
cgacgcctagagagggaaaagaaggaacatgtacaagacatgactgaggaggagatgttg
gatctagctttgagactcagtaaacaagaggcaaactgtgcaacccagagagaacaagtg
gaagatgacgacatgagaaaagccatggcagaaagtcttcagtcagtcggctgcagtcaa
gcttcagaaacgagcttcaaacgagtccggtccgcgccgaagcctcaccaagaccgagac
gccgtatcggcacacgttcgatgcaagctctccttttcgagtaaggacaagaaagccggc
gtgagcatagacgacgttccaaatgcacaagcaagcgctttaaaaagttccgaggaggac
ggagcgcttctgccgatgcctgatctgtctcaggggacgttatcgcgaccttcgcctccg
agtccgaccctcccctctgtgccttctgcagattctcaagaatcctgctcttcacgtctg
gctaaacaggaatttgacgcacaccgtcccgaggatgcgtcttcgcagagcgacgctccg
ctcgaggggtcgcccgtcttcctccgtcattgcagcgtaagactgaaccagaacgttctg
agctcaagcagatcctttaggatttcctcacatacgaccaacagcgctctcggctcaacc
agcccgaacccaaagtcccaaagcagcccgcttcctcccaaaagccccgtttttcctaaa
actgacttaaagagatgcactcaattaacacggggtaaatttagcgattcccacagcagc
cgttcagacggcgtacgcaaacccgaagacgcgtttcaagaatcctccagccgtaaatgc
agagattccccgaaacgcctttcacgcggcaagaaagctccgtcgtcatcacgcgcctcg
gcgcccgaagacgacagtcaggaagctggcaaggtgaaggaacaagcgaaggaagaatcc
tctcgaggaaccggattaagaactgtgtcagacagagcaccgacgttagacacgtcttct
cctgcagacggctgtcctacggatgggttaatcagtcacatggtccttcttctgtcagat
gatgatgatgatgatgacgatgatgacaagattattcatccgagcccggtcttccctcag
ggccgtgcttcgtgcgcaggcaagccgaagctctcgccgacgcaactctgcccttcctca
ccctcagccatcaccacaccagactcaaatcacaccaaatcctcttcccaggttcagtct
gagcagcctaatgtgtccaggaagtcctctgactccagactctcttcagcagccgaaggg
aaggatataggtgttgtatcgtacttctggggcatcccgttctgccccaaggggcaaagc
ccagacgattacacccgagtcatcctcacccagctggaggtgtatgagaagagcctgaaa
gaggcccaacgacggctactgcacaaagccgactggggccttcctgtgttcccgtgtccg
gtagagcggccacacggcaggagactgaagcgacaccgagcccctcggcttctggacgaa
gacgaggaagaagaacaagaagaagacgaggagaaggaagaggttcagggtcgagacgag
gaagaaaaagagaaaaagaaaaaagtggaacgtaagaaaagagaagactctcagtcctgt
tcggaagaaggagcgcagaacggtcagcacgaaacctacgtcgtcgtgtcctcccctgag
acgcaggaggagctcgggcagaaatcacccttaatgcttgggcaaaaagagtctacaaat
ccagcgaaaccttccagttgcaggaaacttattcctcaggacctttcagaagacactcag
atacagtcagagcccgatgagctcggagaagaggttcaggacggaagtttcgacatggag
ggcgccgtgtgtccagaaacccagatgacaccagagctgatggtgaccagtcctgcacag
tcaaacgctgacggcatggaggtggacgaagtgaccgagtcaccccctgaagctgacctg
ggagagaggatggagcaggagcgcccaggtgaggagccgtcgtggatggagtcagttcct
tctcaggtggagtgtcccatgtgcactcgcctcttccctctcagtaagatcgaggtgcac
gcggcctactgtaacggcgccgtggaggagcaggtccaggaacagcaggacaacctttca
caagcgagcgctagacggaagatcacgagaagaacaacggaggacgacgtgacgtttgag
aaatcagagcagcgagagaaatgcttcttgtgtaaaaagtttttcacgactaaggagtac
agacatcatgtggatcagtgcattcaacagaaagcgctcggaccaaagcagggaaacggc
ttgctgtctgctttaaatcggacagaaacggtgcatctggatgacagcagagctggaccc
tctaatactactgcaagaaacagtcgcagcctcgcagacacgtccgtgacgcctggtgac
agctcggactctcaagcttctggttattacgtcagctcgtctcctatcaaatccttcact
cccatatcagaaatcaccgactgcctcataaacttccggcagcagtactcggaccggacc
agccagagactcgggaggaagaggaaattcaagagatag

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