Tachysurus fulvidraco (yellow catfish): 113662451
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Entry
113662451 CDS
T08119
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113662451 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113662451 (uimc1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
113662451 (uimc1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
ICAM1_3_5_D2
Motif
Other DBs
NCBI-GeneID:
113662451
NCBI-ProteinID:
XP_047661496
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Position
21:complement(2025655..2043017)
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AA seq
952 aa
AA seq
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MPRRKRSTVRSERRRKVCRRDNNNDQEEEEEEEDNTLVISDSDSDEEEEDSAKKVSLRAA
RRLEREKKEHVQDMTEEEMLDLALRLSKQEANCATQREQVEDDDMRKAMAESLQSVGCSQ
ASETSFKRVRSAPKPHQDRDAVSAHVRCKLSFSSKDKKAGVSIDDVPNAQASALKSSEED
GALLPMPDLSQGTLSRPSPPSPTLPSVPSADSQESCSSRLAKQEFDAHRPEDASSQSDAP
LEGSPVFLRHCSVRLNQNVLSSSRSFRISSHTTNSALGSTSPNPKSQSSPLPPKSPVFPK
TDLKRCTQLTRGKFSDSHSSRSDGVRKPEDAFQESSSRKCRDSPKRLSRGKKAPSSSRAS
APEDDSQEAGKVKEQAKEESSRGTGLRTVSDRAPTLDTSSPADGCPTDGLISHMVLLLSD
DDDDDDDDDKIIHPSPVFPQGRASCAGKPKLSPTQLCPSSPSAITTPDSNHTKSSSQVQS
EQPNVSRKSSDSRLSSAAEGKDIGVVSYFWGIPFCPKGQSPDDYTRVILTQLEVYEKSLK
EAQRRLLHKADWGLPVFPCPVERPHGRRLKRHRAPRLLDEDEEEEQEEDEEKEEVQGRDE
EEKEKKKKVERKKREDSQSCSEEGAQNGQHETYVVVSSPETQEELGQKSPLMLGQKESTN
PAKPSSCRKLIPQDLSEDTQIQSEPDELGEEVQDGSFDMEGAVCPETQMTPELMVTSPAQ
SNADGMEVDEVTESPPEADLGERMEQERPGEEPSWMESVPSQVECPMCTRLFPLSKIEVH
AAYCNGAVEEQVQEQQDNLSQASARRKITRRTTEDDVTFEKSEQREKCFLCKKFFTTKEY
RHHVDQCIQQKALGPKQGNGLLSALNRTETVHLDDSRAGPSNTTARNSRSLADTSVTPGD
SSDSQASGYYVSSSPIKSFTPISEITDCLINFRQQYSDRTSQRLGRKRKFKR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggagaaaaaggagcacagtgcggagtgagagacggagaaaagtttgtcggaga
gacaacaataacgaccaggaggaagaggaagaggaggaggataacacattggttatctct
gactctgatagtgatgaagaggaagaagacagtgccaagaaagtgagtctgagagcagcg
cgacgcctagagagggaaaagaaggaacatgtacaagacatgactgaggaggagatgttg
gatctagctttgagactcagtaaacaagaggcaaactgtgcaacccagagagaacaagtg
gaagatgacgacatgagaaaagccatggcagaaagtcttcagtcagtcggctgcagtcaa
gcttcagaaacgagcttcaaacgagtccggtccgcgccgaagcctcaccaagaccgagac
gccgtatcggcacacgttcgatgcaagctctccttttcgagtaaggacaagaaagccggc
gtgagcatagacgacgttccaaatgcacaagcaagcgctttaaaaagttccgaggaggac
ggagcgcttctgccgatgcctgatctgtctcaggggacgttatcgcgaccttcgcctccg
agtccgaccctcccctctgtgccttctgcagattctcaagaatcctgctcttcacgtctg
gctaaacaggaatttgacgcacaccgtcccgaggatgcgtcttcgcagagcgacgctccg
ctcgaggggtcgcccgtcttcctccgtcattgcagcgtaagactgaaccagaacgttctg
agctcaagcagatcctttaggatttcctcacatacgaccaacagcgctctcggctcaacc
agcccgaacccaaagtcccaaagcagcccgcttcctcccaaaagccccgtttttcctaaa
actgacttaaagagatgcactcaattaacacggggtaaatttagcgattcccacagcagc
cgttcagacggcgtacgcaaacccgaagacgcgtttcaagaatcctccagccgtaaatgc
agagattccccgaaacgcctttcacgcggcaagaaagctccgtcgtcatcacgcgcctcg
gcgcccgaagacgacagtcaggaagctggcaaggtgaaggaacaagcgaaggaagaatcc
tctcgaggaaccggattaagaactgtgtcagacagagcaccgacgttagacacgtcttct
cctgcagacggctgtcctacggatgggttaatcagtcacatggtccttcttctgtcagat
gatgatgatgatgatgacgatgatgacaagattattcatccgagcccggtcttccctcag
ggccgtgcttcgtgcgcaggcaagccgaagctctcgccgacgcaactctgcccttcctca
ccctcagccatcaccacaccagactcaaatcacaccaaatcctcttcccaggttcagtct
gagcagcctaatgtgtccaggaagtcctctgactccagactctcttcagcagccgaaggg
aaggatataggtgttgtatcgtacttctggggcatcccgttctgccccaaggggcaaagc
ccagacgattacacccgagtcatcctcacccagctggaggtgtatgagaagagcctgaaa
gaggcccaacgacggctactgcacaaagccgactggggccttcctgtgttcccgtgtccg
gtagagcggccacacggcaggagactgaagcgacaccgagcccctcggcttctggacgaa
gacgaggaagaagaacaagaagaagacgaggagaaggaagaggttcagggtcgagacgag
gaagaaaaagagaaaaagaaaaaagtggaacgtaagaaaagagaagactctcagtcctgt
tcggaagaaggagcgcagaacggtcagcacgaaacctacgtcgtcgtgtcctcccctgag
acgcaggaggagctcgggcagaaatcacccttaatgcttgggcaaaaagagtctacaaat
ccagcgaaaccttccagttgcaggaaacttattcctcaggacctttcagaagacactcag
atacagtcagagcccgatgagctcggagaagaggttcaggacggaagtttcgacatggag
ggcgccgtgtgtccagaaacccagatgacaccagagctgatggtgaccagtcctgcacag
tcaaacgctgacggcatggaggtggacgaagtgaccgagtcaccccctgaagctgacctg
ggagagaggatggagcaggagcgcccaggtgaggagccgtcgtggatggagtcagttcct
tctcaggtggagtgtcccatgtgcactcgcctcttccctctcagtaagatcgaggtgcac
gcggcctactgtaacggcgccgtggaggagcaggtccaggaacagcaggacaacctttca
caagcgagcgctagacggaagatcacgagaagaacaacggaggacgacgtgacgtttgag
aaatcagagcagcgagagaaatgcttcttgtgtaaaaagtttttcacgactaaggagtac
agacatcatgtggatcagtgcattcaacagaaagcgctcggaccaaagcagggaaacggc
ttgctgtctgctttaaatcggacagaaacggtgcatctggatgacagcagagctggaccc
tctaatactactgcaagaaacagtcgcagcctcgcagacacgtccgtgacgcctggtgac
agctcggactctcaagcttctggttattacgtcagctcgtctcctatcaaatccttcact
cccatatcagaaatcaccgactgcctcataaacttccggcagcagtactcggaccggacc
agccagagactcgggaggaagaggaaattcaagagatag
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