Tachysurus fulvidraco (yellow catfish): 113662600
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Entry
113662600 CDS
T08119
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113662600 (vps35l)
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Others
Retriever complex
113662600 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG6
APG6_N
BH3
FapA
Suppressor_APC
Motif
Other DBs
NCBI-GeneID:
113662600
NCBI-ProteinID:
XP_027033341
LinkDB
All DBs
Position
8:12429498..12443387
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AA seq
1413 aa
AA seq
DB search
MEGSKSSSTTMQVSFVCQRCNQPLKLDTSFNVLDQLTFQELIAPLVTVTPSKQTESGDTD
SPPEEAFVESKQDGISRKYIPPARMMSTESANSFTLIGEASDGGTMENLSHRLKVTSHLF
DIMSGQSDVDHPLCEECTDTLLDHLDTQLHITENECQNYKKCLELLSQLQVEDEDTLLKE
LQQLRQEEETLIQDLEAIEQQRESVAMEITEARRHAQQLDTEELQYQKEYCEFKRQQLEL
DDELKSVDNQMRYCQAQLDRLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEI
NAAWGQTVLLLHALANKMGLRFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDN
KFDHAMVAFLDCVQQFKEEVEKGDTGFCLPYRMDVDKGKIEDTGGSGGSYSIKTQFNSEE
QWTKALKFMLTNLKWGLAWVSSQFYNRKMASVQWHSRTRSYDTELRSCRASAFSVQSGDY
HPLKPITVTDSKSRRGARKGSTSSSSSSSSSVAPDPLSSMLEGTDPLSLFAAASASETPA
LSHSSSAMELGRKRKEKEEEVGCDFEPWSAKRGEILARFTTTEKLSINLFMGSDKSKATS
PSSAVSEKVRNRLEELDDIEEGSQRELLNLSQQDYVNRIEDLNHSLKEAWASDQKVKALK
IVIQCSKLLSDTSVILFYPSKFVLITDILDTFGQLVYDRIWSMCSDPDPLPDSFSVEDVN
DTAKETCLNWFFKIASIRELIPRLYVEAAILKCNRFVNKSGIQETLPRLTAMIRGIGDPL
VAVYARAYLCRVGMEVAPHRKDSLNKNFFDLLASFRQIHSDSVQNQLVIQRVEIPVYLTL
YSPAIHWILQCVAYRAPDVLLTEMMERCKKLGNNALLLNSVMWAFRAEFVAARATDFIGM
IKECDEAGFPKHLLFGSLGRSLACADPPECERLPILNEAWKVITKVRSPQDYITCAEIWV
EFTCRHFTKREVNTVLADIIKHMTPDRAFEDAYPQLQSVMTKILTYFHNFSVLFSMEKFL
PFLDIFQKDSVRVEVCKSIMDIFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTVEDEK
RALALLINGFIRMVSFGRDFEQQLSFCVEARATFCNLEPVVIQLIHMVNHLAMETRRVMG
GNHSRKTAAFVRACAAYSFITIPSLSNIFSRLHLYLLSGQVALANQCLSQADSFLKAAVS
ILPEVPRVINIDGKQRSSEPFLLDFISNFLSTLLVVPDHPEQGVLYLVRGLLNMVQDYTW
EDNSDAKVRVYISAIPLLAAMSQETYLYTIPKVDSNETLYGGDPKFVAEISRVCETVIGQ
VLDYLKTLSQDEGARRQGTLAFSLFGCLLAHGDLRNNKLNQLAVNLWNLSHKNGYCDTRT
SVRTLEHIKQQAQQPDMAHLSDMLLRLSLQSRT
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccaagtcatccagcaccacaatgcaggtgagctttgtgtgtcaacgctgc
aaccaacctctcaaactcgacaccagcttcaacgtcctggaccaactcaccttccaggag
ctcatcgctccactggtcaccgtgacaccaagcaagcaaacagaaagcggtgacactgac
agtccacctgaggaggcgtttgtggagagcaagcaagatggcatctcacggaagtacatc
cctcctgctaggatgatgtccacagaaagcgctaacagcttcacactaatcggtgaggcc
tcagatggagggaccatggagaacctgagccacaggttaaaggtaacgagtcatttgttc
gacatcatgtcagggcagagtgacgtcgatcacccactgtgtgaggagtgtacagacaca
ctgctcgatcacctagacacacagctccacatcacagagaacgagtgtcaaaactacaag
aagtgtctggagttgctgtcacagctgcaggtggaagacgaggacacgctgctgaaagag
ctgcagcagctcaggcaggaggaggagacgctcatccaggacctggaagctatcgaacag
cagcgggaatccgtcgccatggagatcaccgaagcacgacgccatgcgcagcagctggac
acagaggagctccagtaccagaaagagtactgcgagtttaaacggcaacagctggagctg
gatgatgaactgaagagtgtcgataatcagatgcgctactgccaagctcaactggaccgc
ctgaagaaaaccaatgtctttaatgccacctttcacatctggcacagtggacagtttgga
acaataaacaatttccgtctggggcgattacccagcgttcctgtggagtggaacgagatt
aatgcggcctggggtcagactgtgctgttgctacatgctcttgctaacaagatgggtctg
cgctttcagagatatcgacttgttccttacggaaaccactcatacctggagtcccttaca
gacaagtccaaggagctgccgctgtattgctcaggaggactgcgcttcttctgggataat
aagtttgatcacgccatggtggcatttttagactgtgtgcagcagtttaaagaggaagtg
gagaaaggagacactggattctgcctaccgtacaggatggatgtggacaagggaaagatc
gaggacacgggcggaagtggaggatcgtactccattaaaacacagtttaactccgaggag
cagtggaccaaagcactaaagttcatgctcaccaacctgaaatggggcctggcctgggtt
tcatcccaattctacaaccgtaagatggcttctgttcagtggcattcccgcacgcgcagt
tatgacacggagttgaggagctgccgagcttcagctttctctgtgcagagcggtgactac
catccgcttaaacccattacagtgacagactctaagtcccggcgtggagcccgaaaaggc
agcacatcttcgtcgtcatcttcctccagctctgtggctcctgaccctctgagctctatg
ctggaaggcaccgaccctctgtccctctttgccgcagcttcagccagtgaaactcctgcg
ctgtctcatagcagctctgccatggagctggggaggaagcggaaggaaaaagaagaggaa
gttggctgtgattttgagccgtggtctgctaaacggggcgagatcctggccaggttcacc
accacggagaaactctctataaatctcttcatgggctctgacaaaagtaaagccaccagt
cccagctctgctgtctcagagaaagtgcgcaatcgtctggaggagctagatgacatagag
gaaggctctcagagggaactgctgaacctctctcagcaggattatgtaaaccgcatcgag
gacctaaatcattccctgaaggaagcctgggcttcagatcagaaagtcaaagcgctcaaa
atcgtcattcagtgctccaagctgctttctgacacatcagtgatcctgttttaccccagc
aagtttgtcctcatcacagacatccttgacacattcggtcagttagtttatgatagaatc
tggtccatgtgctcggatcctgatcctctgccagactcgttctctgtggaagacgtgaac
gacacggccaaagagacgtgcctcaactggttcttcaaaattgcctccatcagagagctg
atccctcgcctgtatgtggaggctgcgatactgaagtgcaaccggtttgtcaacaaatca
gggattcaggagactcttcctcggctcacggctatgattcgagggatcggagacccttta
gtagccgtgtacgctcgagcctacctgtgcagggtgggcatggaggtggcaccacaccgg
aaggacagcctgaacaagaacttcttcgacctcctggcgtctttccgacagattcacagc
gacagcgttcagaatcagttggtcatccagagggtggagattcctgtctacctcacgctg
tattctcctgccatccactggattctgcagtgtgttgcttaccgagcacccgatgtgctg
ctgacagaaatgatggaaagatgcaagaagctgggcaacaatgctctcctgctgaactct
gtcatgtgggccttccgggccgagtttgtggcagcaagagccaccgattttattggcatg
atcaaggagtgtgacgaggctggatttcctaagcacctgttgtttggctctctgggccgg
agcttggcctgtgcagatcctcctgagtgcgaaaggttgcccatccttaacgaggcctgg
aaggtcattaccaaagtgcgcagtccacaggactatatcacctgtgctgaaatctgggta
gagtttacctgccgtcattttaccaaaagagaggtgaacactgtgctggctgacatcatc
aaacacatgacccctgatcgagcatttgaggatgcgtatccacagttgcagtcagttatg
acgaagatcctcacctactttcacaacttctccgtcctcttctccatggagaaattctta
cccttcttggacatattccagaaagacagcgtgagagtagaagtctgtaaatccatcatg
gacatcttcatcaaacatcagcaggagccgactcgtgatcccgtcatcctcaacgctctg
ctccacgtctgtaagaccatgcacgactccgtcaacgctctcactgtggaggacgagaaa
agggctctagctctgctgattaacggcttcattcgcatggtatcttttggccgggacttc
gagcagcagttgagtttctgtgtggaggccagagccacgttttgtaacttggagccagtt
gtcattcagcttattcatatggtgaatcatttagccatggagacgaggcgagtgatgggc
gggaatcactcacgcaagaccgctgcgtttgtccgggcatgtgcagcatacagcttcatc
accatcccgtctcttagtaacatcttcagccgtctgcatctgtacctgctgtcaggacag
gtggctttggccaatcagtgtctttcccaggccgattcattcctgaaagcagcagtcagt
attttacctgaagtgccacgtgtcattaacatcgatggtaaacaacgttcttctgaaccc
tttctcctcgacttcatcagcaacttcctgtccacgctgctggtggtgccggaccaccct
gagcagggcgtgctatatttggtgagaggattgttgaacatggtgcaggattacacgtgg
gaggacaacagtgacgctaaagtacgcgtgtacatcagtgctatacctctgctggctgct
atgagtcaggaaacctatctctacactattcctaaagtggactctaacgagacgctgtat
ggtggtgaccccaagtttgtagctgagatcagtcgagtgtgtgaaactgtgattggccaa
gtgctggattacctgaagactctgagccaagacgagggagcacgccggcagggaactctc
gcattctctctcttcggctgtttgttggctcatggagatctacgcaataacaaactcaac
caactcgccgttaatctgtggaacctgagccataagaacggctactgtgatacacgcacc
tcggtgcgcacactggagcacattaagcagcaggcccagcagcctgacatggctcaccta
tccgacatgctcctgcggctctccttgcagtcacggacctga
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