Tachysurus fulvidraco (yellow catfish): 113662764
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Entry
113662764 CDS
T08119
Symbol
thbs3b
Name
(RefSeq) thrombospondin-3b
KO
K04659
thrombospondin 2/3/4/5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagosome
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113662764 (thbs3b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113662764 (thbs3b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113662764 (thbs3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113662764 (thbs3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113662764 (thbs3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113662764 (thbs3b)
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
113662764 (thbs3b)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Phagocytosis
Opsonins
113662764 (thbs3b)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113662764 (thbs3b)
Exosomal proteins of colorectal cancer cells
113662764 (thbs3b)
Exosomal proteins of bladder cancer cells
113662764 (thbs3b)
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113662764 (thbs3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
113662764
NCBI-ProteinID:
XP_027033656
LinkDB
All DBs
Position
7:complement(4132937..4147142)
Genome browser
AA seq
957 aa
AA seq
DB search
MEGATLLSKMMLFLHVALIFHPTNCSEMKVIDALALSGGLRMAAAVEDLVGGLEKMKEVF
VTSTFRLPPKLGGMLLGIYGKDDGKKYLEITVIGKITKVLVRYLRSDGKLHSLNLHNPAL
SDGRSQSLILKVGGLRKSHISFELYINCRLIDSAHGLPSLAKLPQKVESVEVRSGERNFA
RMQGSVESLKLALGGSLPKAGLLTDCSLQGDSTQHNTVGSDINTLLGDHTKALIGQLIIF
NQIMGNLREDMREMTKEMSLIRNTILECQVCGFNEPQSRCQSKPCYDGVACVDVLEFPGY
RCGSCPAGTTGNGTHCQDIDECEAQPCFSPHMCMNSVKGFRCESCPPGFSGPELSGVGMD
FARNHIQECVDIDECAAQTGACVPNSVCINTAGSFQCGPCKSGFVGNQTSGCFLRRPCDL
LGYDPCDVNAHCVMERGSDVSCVCNVGFAGNGNICGVDSDLDGYPDEALPCIDNDKHCRA
DNCGSTPNSGQEDKDGDGLGDQCDEDADGDGIKNMEDNCRLMPNKDQQNSDSDSYGDACD
NCPNVPNGDQRDTDINGVGDSCDNDIDGDGIPNMLDNCPKIPNAMQTDRDDDGVGDACDS
CPEVNDPTQSDVDNDLVGDICDTNQDTDGDGLQDTRDNCPEIPNSSQVDSDNDGIGDDCD
DDDDNDGVPDASYPGPDNCRLIPNPNQKDSDADGVGDVCESDFDNDKVSDVMDACPENAD
ITMTDFRAFQTVILDPHGDSQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGT
FHVNTMTDDDYVGFIFAYQDSSSFYVVMWKQTEQTYWQNLPFTALAEPGLQLKAVKSRTG
PGEHLRNALWHTGDTHGEVTLLWKDPRNVGWSDKTSYRWSLSHRPQVGYIRMRLYEGTAL
VADSGVVIDTSMKGGRLGVFCFSQENIIWSNLGYRCNDTIPDDFYLHHKQLNLRTGA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcgactttactttcgaaaatgatgctttttctgcacgtggcgctgattttt
catcccacaaactgctcggaaatgaaagtaatcgatgcgttggcgttgagtggtggcctt
cggatggcggcggcggtggaggatttggtgggaggtttggagaaaatgaaggaagtgttt
gtgacctccacgttccgtctcccacctaaactgggaggtatgctgttgggaatctacggc
aaagacgacggcaagaaatacctggagatcaccgtcatcggcaagatcactaaagtgtta
gtaagatatttgcgctctgatgggaagctccactcgctgaatctgcataaccccgccctc
tctgacggtcggagccaatccctcatcctgaaagtgggcggactcagaaagagccacatc
agctttgagctctacattaactgtcgtctgattgactccgcccacgggctgccctcattg
gccaagctgcctcagaaggtggagtctgtggaggtccgtagcggagaaaggaatttcgcc
cgaatgcagggttcagtggagtctttaaagctggctcttggtggttctctccctaaagct
gggctcctcactgactgctcactgcagggagactcaacacaacacaacacagtgggcagt
gacattaacacattgctgggtgatcacactaaggctctgattggtcagttgatcatcttc
aatcagattatgggcaatttgcgagaagacatgagagaaatgaccaaggagatgtcttta
atcaggaacaccatcctggagtgtcaagtgtgtggttttaatgagcctcagtctcggtgt
cagtctaagccgtgttatgacggtgttgcatgtgtggatgttttggagtttccagggtat
cggtgtggctcgtgtcctgcaggaaccacaggcaatggcacacactgccaggacattgat
gagtgtgaggcacagccatgtttctctcctcacatgtgtatgaacagtgtgaaggggttc
cgctgtgagtcgtgtccaccagggttctctgggcctgagttgagtggagtcggcatggat
tttgcccggaaccacatacaggagtgtgtggacatagacgagtgtgcggcacaaaccggc
gcctgcgtccctaactccgtctgcatcaacacagcgggttcgtttcagtgcggtccgtgt
aagtcgggtttcgtggggaatcagacgtcgggctgttttctcaggagaccgtgcgatctg
cttggctacgatccgtgtgacgtcaacgcgcactgtgtgatggagcgcggcagcgacgtc
tcctgtgtgtgtaacgtggggtttgcagggaacgggaacatctgcggtgtcgactctgac
ctcgatggctatccagatgaagcgcttccctgcatcgataacgataaacactgcagagcg
gataactgtggatccactccgaactctggtcaggaggacaaggatggcgacggtctcggg
gatcagtgtgacgaagacgcggacggagatggaataaagaacatggaggataattgtcgt
ctaatgcccaataaggaccagcagaactcagactctgactcgtacggtgatgcgtgtgat
aactgtccaaatgtcccaaatggagatcagcgggacacggacattaacggcgtgggagac
agctgtgataacgacattgatggagacggaatccccaacatgctggataactgcccgaaa
atccccaacgccatgcagacggaccgcgatgacgacggagtgggagacgcgtgtgacagc
tgtcctgaggtcaacgaccccactcagtcggatgttgataatgacttggtgggagacatc
tgtgataccaaccaggacactgatggcgacggtctccaggacacgagggacaactgccct
gaaatccccaacagctctcaggttgactcggataacgacggcattggagacgattgtgac
gatgatgacgacaacgatggggttccagacgcttcttatcctgggccagataactgcagg
ctcatacccaaccctaaccagaaagactcggacgctgatggagtgggtgacgtgtgtgag
agcgactttgataatgacaaagtgagtgacgtgatggacgcctgtcctgaaaacgctgac
atcaccatgacagacttccgagccttccagacagtcatcctggacccgcacggagattcc
cagatcgatcccaactgggtggtactcaatcaggggatggagatcgtacagacaatgaac
agtgaccccggtttggctgtgggctacacagcgttcaacggcgtggattttgagggaact
ttccacgtgaacacgatgacggacgacgactacgtgggcttcatcttcgcctatcaggac
tcgtccagcttctatgtggtgatgtggaagcagacagagcagacgtactggcagaacctg
ccgttcactgcgctggctgaaccgggcctgcagctgaaggccgtcaagtctcgcacaggt
ccaggtgagcatctgcgtaacgcactgtggcacaccggcgacacacacggagaggtgacg
ctgctctggaaggatcccaggaacgtaggatggagcgataaaacgtcgtaccgttggagc
ctcagtcatcgtccgcaggtcggatacatcagaatgcgtctgtatgaaggcaccgctcta
gtcgctgactccggcgtggtgatcgacacctcgatgaaaggaggacgtctgggtgttttc
tgcttctcacaggagaacattatctggtccaatctcggctatcgctgcaacgatacgatc
ccagatgatttttacctccaccacaaacagctgaacctcaggacaggagcatag
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