Tachysurus fulvidraco (yellow catfish): 113662851
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Entry
113662851 CDS
T08119
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
113662851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113662851
Membrane trafficking [BR:
tfd04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
113662851
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_CDC20-Fz
ASA1
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_ACSF4
EIF3I
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
CFAP251_N
Beta-prop_WDR3_2nd
Beta-prop_WDR41
Beta-prop_VPS8
PAC11
DSE1_N
Beta-prop_IFT140_1st
WDR72_alpha-sol
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_Aladin
TRM82_WD
Myosin_head
CD1375-like
Motif
Other DBs
NCBI-GeneID:
113662851
NCBI-ProteinID:
XP_047661342
LinkDB
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Position
21:21094335..21159061
Genome browser
AA seq
1149 aa
AA seq
DB search
MSGNSLVLPIVLWGRTAPTHCISSLLVMDDLATIISGCHDGQICIWDLTPDLEINPRALL
FGHSTSVTCLSKASASSDKQYMVSASESGEMCLWDVSDGRCIEFTKLACAHTGIQFYQFT
IGTQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITADVSRMQDLDPVFEEESKPIYCQNCQSISFCTFTQLSLLVVCSKYWRV
FDAGDFSLLCSVPSENEQSWTGGEFIAADKVIIWTEDGCSYIYKLPASCLPASEHFRSDV
GKTTEGSIPPLVYSIADRADKQLEEECEGQCVIVCIPDSVSGPELYTPELLYLQRPLEAP
LLICPPVTRFFYGRREPFHKLLVQGDSAGRLTMWSIPDTSPLQPLSSAAELQVSSTISLQ
EAFDKLTPLPAGIIDQLSMLPGSEEPIKVTASVYIPSQGRLVCGREDGSIVLVPATQTAI
VQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSPRYDQRSLVSGGVDFSVIVWDIF
TGEMKHIFCVHGGEITQLLVPPENCSTRVQHCVCSVASDHSVGLLSLRERKCIMLASRHL
FPIQVIKWRPCDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPASVDG
LNHSAVNLKQAMTRRSLAALKNMAQHKLHTLATNLLAADNADKGNLPKYSHNALVVQAMK
TNMTDPDMHVLFFDVEAVIIQLLTEEAQRPNPMLVSPETLQKTPGGADKGGSFLANKIFK
QVKETIKENIKEHLLDEDEDEEEEARRREEKSKSLSLLEYNLTMDTAKLFMSCLHAWGLN
SMLDEVCVSRLGMLRPHTPISFGLISRGGHMSLMLPTFKDSLLRQLVRAVGPEGRKLSVS
EVVGKGTYGVSRAVTTQHLLSVISLANTLMSMTNATFVGEHMKKAPARPPRPGAPESPKK
TPPQVSTPAMQSQIKQAAAAASTSALAPGTGAPHTASTFHSSPSVNEGWSQLAAMHCVML
PDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIGQSGRKDTIDLWAPYLP
QYVDAVSSPGVAPETAQPTPPTSEAPPTEPKAPEEEMDVTDDDITAGRRRFSCTVITLED
IILLIAHIN
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaacagtctggtgttacccatagtgctgtggggccgcaccgctcccacacac
tgcatctccagcctgctggtgatggacgacctggccaccatcattagcggctgccatgac
ggtcagatctgcatctgggacttgacccctgaccttgagatcaacccgcgcgctctgctg
tttggacacagcacctccgtcacctgtctgtccaaggccagtgccagcagcgacaaacag
tacatggtcagcgcatcagagagcggggagatgtgtctgtgggatgtgagtgatgggcgc
tgtattgagttcactaagctggcctgtgctcacacaggcatacagttttaccagttcacc
atcgggacccagcgtgagggtcgtctgctgtgtcacggccactacccagagatcctcgtg
gtggacgccaccagcctggaggtcctttactccctggtgtccaaaatctctcctgactgg
atcagctccatgagcatcattcgctcccatcgcacccaggaagacacagtggtggctgtc
tctgtgaccgggattctgaaggtgtggatcatcacggcagacgtgagccgaatgcaggac
ctggaccctgtatttgaagaggagtccaagccgatctactgccagaattgtcagagtatt
tcattctgcaccttcacacagctgtctctgctcgtcgtctgctctaaatactggagggta
ttcgacgctggagatttctcgctcctgtgctccgtgcccagcgagaacgagcagtcgtgg
accggaggagagttcatcgccgctgataaagttataatctggaccgaggacggctgcagc
tacatctacaagcttccagccagctgtcttccagctagtgaacacttccgcagtgatgtg
gggaaaacaacagaaggttccattcctcctctggtgtacagcattgcggatcgagcagac
aaacagctggaggaggagtgtgagggccagtgtgttattgtgtgtatccccgacagcgta
tccggtccggagctctacactcctgagctgctgtacctccagcggcctctagaggcacca
ttactgatctgtcctcctgtgacgcggttcttttacggacgcagagagccgttccacaag
ctgctggttcagggcgactcagcaggcaggttgaccatgtggagcatcccggacacttca
ccgctgcagccgctgtcttcagccgcagaactgcaggtttcctccactattagccttcag
gaggcgttcgataagctcactccgctccccgcgggcatcatcgaccagctgagcatgctg
ccaggctccgaggaaccgataaaggtgacggcgagcgtgtacatcccgtcacagggccgc
ctggtgtgtggcagggaagatggcagcatcgtcctggtgcccgccacacagaccgccatc
gtccagctgctacagggagaacacatgctgcgcagaggctggcctcctcaccgcaccctg
agaggacacaggaataaggtgacgtgtctgctgtaccctcaccaggtgtccccacgttat
gaccagcgctctctggtctcgggcggtgtggatttctccgtcatcgtgtgggacattttc
accggagagatgaaacacatcttctgcgtacacggaggagagatcacccagctcctcgtc
ccacccgagaactgcagcacccgggttcagcactgcgtgtgctccgtagcgagcgatcac
tcggtgggattgttgagtctccgggagagaaagtgcatcatgctggcgtcgcgccacctc
ttccccatccaggttataaaatggcgcccgtgtgacgattacctggtggtgggctgctcc
gacggctccgtatacgtctggcagatggacacaggtgcattagaccggtgtgtgatgggt
ataacagcagtagagatattaaacgcgtgtgacgaggctgttcctgcgtctgtagatggt
ttaaatcattcggcggtgaatctgaagcaggccatgacacgtcgcagcctggcagccctc
aagaacatggcacaacacaaactccacacactcgccaccaacctgctcgctgcagacaac
gcagacaagggaaacttgcctaaatattcccacaatgcactggtggtgcaggccatgaag
accaacatgaccgacccggacatgcacgtcctgttcttcgacgtcgaagccgtgatcatc
cagctgctgaccgaggaggcgcagcgtcccaatcccatgctcgtgtcccctgaaacactg
cagaaaaccccagggggcgccgacaagggcggatcgttcctggccaataagatcttcaag
caggtgaaagagaccatcaaagagaacatcaaggagcacctgctggacgaggacgaggac
gaggaggaggaagctcgccggcgtgaggagaagtccaaatccctcagcctgctggagtac
aacctgaccatggacacggccaagctcttcatgtcctgccttcacgcgtggggtctgaac
agcatgctggacgaggtgtgcgtgagccgactgggcatgctcagaccgcacacgcccatc
tccttcggcctgatctcgcgcggaggccacatgtccctcatgctgcccaccttcaaggac
tccttactgaggcagctggtgagggccgtcggccccgagggcaggaagctctccgtttcc
gaggtggtgggcaagggcacgtacggcgtgtcgcgtgccgtcacgactcagcacctgctg
tctgtcatctcgctggctaacacgctcatgagcatgaccaacgccacgttcgtaggagag
cacatgaagaaagctccggccaggcctccaagacccggtgccccagagagccccaaaaag
acgcccccccaggtctccaccccggcaatgcagtcccagatcaaacaagctgctgccgcc
gcttccacctccgctctcgcacccggcacaggggcacctcacaccgcctccacctttcat
tcctctccctccgtaaatgaaggttggagtcagctggctgcgatgcattgtgtgatgctg
cccgacctgctggggctcgataagtttagacccccactactggagatgctcgcacgcagg
tggcaggatcgctgcttggaggtaagggaagcggcccaggctctcctgttagcagagctg
cgcaggatcggtcaatccggcaggaaggacactatcgacctgtgggctccttacctgcct
cagtatgtggatgctgtcagctcacccggagtcgctccagagacagctcagccgactcct
cccacatctgaagccccgcccactgaacccaaagctccagaggaagaaatggacgtcacc
gacgatgacatcactgcgggtaggaggcgtttctcttgtactgtaataacgctggaagac
attattttgctaattgcgcatattaattag
DBGET
integrated database retrieval system
