Tachysurus fulvidraco (yellow catfish): 113662888
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Entry
113662888 CDS
T08119
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113662888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113662888
03036 Chromosome and associated proteins [BR:
tfd03036
]
113662888
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
113662888
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113662888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
113662888
NCBI-ProteinID:
XP_047665216
LinkDB
All DBs
Position
26:15942175..15967896
Genome browser
AA seq
1871 aa
AA seq
DB search
MSAEVLRLEPVAGGSSGGSGGKLGLLINKLHTFLAVSTEQGGEHSLPGHWSGAMAKEFIE
QQQAESRAAEECMQPGISSEAKSSAARSRRKPLVVTKHSGLNESDASSDSGTEDVLSVNS
SDPDTTCLPKGTVFVLPEPVSNEVRDEFRGPEFRSKRVKQYKDFSDKRRGGSDIERVNCT
ACGQQVNHFQRDSVYQHPALKVLICKSCYKYYMSDDISKDAEGMDEQCRWCAEGGSLIGC
DYCSNAFCKKCVLRNLGRRELSAILEEERKWYCYVCSPEPLMDLVLACDSVLQNLEKICK
RTGVGGGARGKQRGGRGGTGTLSSAPSRGLCERMQRVVDMTTSLNRSFVDFMQSEKDEEA
SEEEDVDRARRLMMFRTILQDLHQAHAALQEALDRELYGGKREPQRQRAKPRQRKPRASR
SSGVTKELVVKLTPVPLESSVNPDSNADAGANAADIVEINKQMEEEEKKEKVEKMEGMAV
RKEGTDEVKVEEKCEGTVGAATEQENTDDEEDEGDEMEMAEENKRSPRVKTTPRRRRSDT
THADLEEDSDSDEVPAVLLQTATAAMATSEEEGGVDSDGGRADTNQEVRKQCLFGLVKTT
TPCQDRTSRKRKLKERSLSSSSSSSSSSLVGKVADPGSKVRRSLPHKVAKTTVDSESLSS
DQEMDSSDSDELEQKIKPLSDVTLMGTGTFQQSSGDEVDVCPAPIMLDEDDVENRIAKQI
LLAEIRANLSSSSDQDCSSDTSWSRAEDQDSETESKKGDEEKVEGPAGKMDNAEDSEPTD
NSSDSDYPAQPPQSRHRLLHYRLDPRDPLSKDGEEKSADWTRERKKKRRNSQTDVSSDNQ
ESASEESAMSEAVSQSEDEDVSIVKQKGSVVEGEPHALLGKDGAEGQTEADNTTSEECVS
TVKGRRKIRRILKVQQLAKETQAALKEEEERRKRLAERERRRRLEEESRVQERDETEVII
VAETTVPKPVPLLLELNDATRECLVQVDTHLLSKLKPHQREGVKFIWDSCCESVAKVKSS
PGSGCLLAHCMGLGKTLQVITFLHTVLTCELMELKTALVVCPLNTVLNWKSEFDKWQRGI
RKKKLEVTELATVKLVSSRVNALTSWHTRGGVMIMSYELYRILTDGDKVKYSKQRENLRR
VLRDPGPDIVVCDEGHVLKNKATAIYKAMRSIRTRRRIVLTGTPLQNNLTEYHCMVSFVK
QNLLGSLREFQNRFINPIQNGQCADSTPADVRLMKKRVHVLYELLAGCVQRRDYSALTPF
LPPKREYVLSIRMSTLQCKLYRHYLHNYTGKGVNNLFQDFQILSLIWTHPWCLQLADQNR
GNKGKGEESTSEPALTGGCSEVMKRQNSDECVVEESRDTHSTKTTQEDARSVLNGPPAGW
YREFVSDSDAEVLEHSGKLMLLLEILHCAEQLQEKVLVFSQSLVSLDLIETFLESADKAK
KNGTSRLYKGKLNWVRNKDYYRLDGSTTATARKNCAQEFNNIRNRRCRLFLISTRAGSLG
INLVGANRVVVFDASWNPMYDLQSMFRVYRFGQEKPVYIYRFLAQGTMEQKIYERQVAKL
SLSSRVVDQQQIQRHFTHSQLSDLYNFHPDSNSKSHTVEPADKVLAMLLQHCGQSIVSFH
EHNSLLDHRVEEELSVEERKEAWEEYKLEKTTQTQTQTQTQTQTQTQTQTQAQARVHTQA
SVHKSGELWRKSDHELKIILYKGRMELQKVAQNIKPLSLEFCRQELKKQHPLLDEEVLEQ
KAVQAYECYKRDRPNKIRTYQNKLFTQKKLILKTQQILAERAEPPSRAPPTASTPVSSRF
KTGESSSVSPVQSSQSSLRQPPRSSSPQERIVIDDVIMEHAVDQLVIKGEVQEQHTHTHT
HTNSGSALSLY
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgaggtgctcaggctcgaacccgtggcgggaggcagcagcggaggcagtggg
ggtaaactgggcctcctgatcaataagctgcacacgtttctggcggtttccacagagcag
ggcggtgaacacagcttacctgggcactggagcggtgcgatggccaaagagtttatagag
cagcagcaagctgaatcacgagccgctgaagagtgcatgcagccaggcatctcctcagag
gcgaagtcttctgcagctcgttccagaaggaagccgttggtggtgacgaagcacagcggc
ctgaacgaatctgacgcttcctctgacagcggaaccgaagacgtcttatccgtcaactcc
agtgacccagacacgacctgcctgcctaaaggtacagtgtttgtgttgccagagccagta
tctaatgaagtccgggacgagttcagaggtccagaatttcgcagcaaacgagtgaaacag
tacaaagacttctcagacaaacggagaggaggctctgacatcgagcgagtgaactgtacg
gcctgcggtcaacaggttaaccatttccagagagactctgtctaccagcaccctgcactc
aaagtgctcatctgcaagtcctgttataagtactacatgagtgacgacatcagtaaagat
gctgaagggatggatgagcagtgcaggtggtgtgcggaaggaggcagtctgattggctgt
gattactgcagcaacgccttctgtaagaagtgcgttctgaggaacctcgggcgacgggag
ctttcggccatcttagaggaggagcgcaagtggtactgttacgtgtgcagcccggagcct
ctcatggacttggtgctggcctgcgattcggtgctccagaacctggaaaagatctgcaaa
cggaccggcgtcgggggcggagcccgtgggaagcagaggggtgggcgcggtggaacagga
acgctcagctcggcaccttcgaggggtctgtgcgagcgcatgcagcgtgtggtggatatg
actacgtcactgaaccgctccttcgtggatttcatgcagagcgagaaggacgaggaagcg
agcgaggaggaggacgtggaccgagcgaggagactaatgatgttccgcaccatcctgcag
gacctgcaccaggcacacgccgccctgcaggaagcactggatcgggagctgtacggcggg
aaacgggaacctcagagacagcgtgcaaaacctcggcagcgaaaaccgcgggcttcaaga
agctcgggtgtcactaaggagctggtggtgaagctgacgccggtcccgttagagtcgtcc
gttaatcctgactctaacgccgacgccggtgcgaacgctgccgatatcgtagagatcaat
aagcaaatggaggaggaggagaaaaaggaaaaggtggagaagatggaaggaatggctgtc
agaaaggaaggaacagacgaggtgaaggtggaagagaagtgtgaggggacagtaggtgca
gcaacggagcaggaaaacacagacgatgaagaagacgaaggagacgagatggagatggcg
gaggagaataagcggtcacctcgtgtcaagacgacgccacgccgaaggcgctcggatacc
acgcacgccgacctggaggaagactccgactcggacgaggtgcctgccgtgctgctgcag
accgccaccgctgcaatggccaccagcgaagaggagggtggggtcgacagcgacgggggc
agggccgacacaaaccaggaagtccgaaagcagtgtctctttggcctggtcaaaaccacg
accccttgtcaagatcgaacttcacgcaaacgtaaacttaaggagaggtccttgtcttca
tcttcgtcttcctcatcctcctctttagtcggaaaagtcgcagatcccgggtcgaaggtc
aggaggagtcttccccacaaggttgccaagacgacggtggatagcgagagtttgtcgagc
gatcaggaaatggacagcagcgactcggacgagttggagcagaagatcaaaccgctgagt
gacgtcacactgatgggaaccggaacgttccagcagtcctccggtgatgaggtggacgtg
tgccccgccccgatcatgttggatgaggatgatgtggagaatagaattgcaaaacagatt
ctgttggctgagatcagggctaacttgtcatccagctctgatcaggactgcagctcggac
acctcgtggtccagggccgaggaccaggacagtgagacggagagcaagaagggagatgaa
gagaaagtcgaaggtcccgctggaaagatggacaatgctgaagacagtgagccgactgat
aacagctctgactcggactatcccgctcaacccccgcagtcccgtcatcgcctgctgcac
tatcgtctggacccccgggaccctttgtctaaagacggcgaagagaaatcggccgattgg
acaagagaaaggaaaaagaaacggagaaacagccagacagacgttagcagcgacaaccaa
gaatcagccagtgaggagtcagcgatgagcgaggcggtcagccaatcagaagacgaggac
gtcagcatcgtcaagcagaaggggtcagtcgttgaaggagaacctcacgcacttcttgga
aaggacggcgccgaaggtcagaccgaggcagacaacacaacctcggaggagtgcgtgagc
acggtgaagggccgcaggaagatccggaggattctgaaggtgcagcagctggcgaaggag
acgcaggcggcgctgaaggaggaggaggagaggaggaagaggctggctgagagagaaaga
cggcgacgactggaggaggagagcagagtacaggaacgagacgaaacggaggtgataata
gtagctgagactactgtccccaaacctgtccctctgctgctagaacttaacgatgcaaca
cgggaatgtctggtgcaggtggatacacatctactgagtaaactgaaacctcaccagcgt
gagggtgtgaagttcatttgggacagctgttgtgagtctgtagcgaaggtcaaatcatct
cctggttctggctgccttctcgcccactgcatgggcctcggaaagacactgcaggtcatc
acgtttctacacacagtgttgacatgtgagctgatggagctgaagactgcgctggtggtg
tgtcctctgaacacggtgctcaactggaagtccgagttcgacaaatggcagcgcggcatc
agaaaaaagaaattggaggtgacggagttagcgacggtgaagttggtgtcttctcgtgtc
aacgctctgaccagttggcacacgagaggtggtgtgatgatcatgagttatgaactgtac
cgcattctcacagacggagataaagtcaaatacagcaaacagagggagaacctgcgcagg
gttctgcgggaccccggacctgacatagtggtgtgtgatgaaggccatgtcctgaagaac
aaggcgactgccatctataaagccatgcgctccattcgtacacggcggcgaatcgtcctg
acaggaacgccgcttcagaacaacctcacagagtatcactgcatggtgagttttgtgaag
cagaaccttctgggttccctgcgtgagtttcagaaccgtttcatcaaccccatccagaac
ggccagtgtgccgactcaacacccgctgacgtgagactcatgaagaaacgagtgcacgtc
ctctatgaactcctcgctggatgtgttcagaggcgagattattcagcactgacccctttc
ctgccacccaagcgagagtatgtgctttcaatcaggatgtccacactacagtgcaagctc
tacagacactacctacacaactacaccggaaagggtgtaaacaatttatttcaggatttt
cagatcctgagtctgatttggacacatccgtggtgtctgcagctcgctgaccaaaataga
gggaacaagggcaaaggggaggagtctacatctgaacctgctctgactggtggatgttct
gaagtgatgaaaaggcagaactctgatgaatgtgtggtggaggagagcagagatacacac
tccaccaaaactacacaggaagatgcacgcagtgtgttgaatggtcctccagcaggttgg
tacagagagtttgtatctgactctgacgctgaggtcctggagcattctgggaaattaatg
ctgctgttggagatcctgcactgtgctgaacaactgcaggagaaagtgttggtgttcagt
cagtctctagtttcactggacctgattgaaacctttttggagtctgctgataaggcaaag
aagaatggaacgtcccgtctgtataaagggaagctgaattgggtgcggaataaggactat
tatcgtctggatggttccaccactgcaacagcacgcaagaattgtgctcaggagttcaac
aacatcagaaacagacgctgcaggttatttctcatctctacccgagccggatctttaggg
attaatcttgttggggcaaatcgtgttgtggtgttcgacgcatcgtggaatccaatgtac
gatcttcagagcatgtttagagtgtatcgcttcggtcaggagaaacctgtgtacatctac
cgcttcctggcacagggaacgatggagcagaagatatacgagcgtcaggtggcgaagctg
tctctgtcgtcccgtgttgtggaccagcagcagatccagcgccacttcacacacagccaa
ctgagcgacctgtacaacttccaccctgacagcaacagcaagagccacactgtggagcct
gcggacaaagtgctcgcgatgctcctacagcactgtggccagtccatcgtgtcgttccat
gaacataattcactgttggaccacagggtggaggaggagctcagcgtggaggagaggaag
gaagcatgggaggagtacaagctggagaagacgacacagacacaaacacaaacacagaca
caaacacagacacagacacaaacacaaacacaagcacaagcacgtgttcacacacaggcc
tccgtccataagtcaggggaactgtggaggaaaagtgaccacgagctgaagattatatta
tacaaaggtcgtatggagcttcagaaagttgcacagaacatcaaacccctaagcctggaa
ttctgcaggcaggaattgaagaaacagcaccctctgttggatgaagaggtgctagagcag
aaggctgttcaggcttatgaatgctataaaagagacagaccaaacaagatcaggacttac
caaaacaaactgttcactcagaaaaagctcattctgaagacgcagcagattctggctgaa
agggcggagcctcccagcagagcccctcccactgcatccacaccagtcagttccaggttt
aaaacaggtgaatcttcctcagtgtcaccggtccagagcagccagtcgtctctccgtcag
ccgccgagatcgtcatctcctcaggagaggatcgtcattgacgacgtcatcatggaacat
gctgtagatcagctggtgattaaaggggaagtccaggagcagcacacacacacacacaca
cacactaactcaggcagtgctttaagtttgtactga
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