Tachysurus fulvidraco (yellow catfish): 113663116
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Entry
113663116 CDS
T08119
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113663116 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113663116 (poln)
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113663116 (poln)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
113663116 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
113663116
NCBI-ProteinID:
XP_047675713
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All DBs
Position
1:38988662..39038339
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AA seq
1136 aa
AA seq
DB search
MKRPSRLDLQQLREKDNTLKQWGAEVQGDWRPRDYEDDGNLSGFNPGNNIPSPRKSPPEP
NPLREELLPGNDFVNRGTLQTVMGLSMTHSRISGRKERIQLMASLEEGNKAEAITQTPPL
KRWRFDNLHLPITSCSRRFERDDSGQKSDIVKANENLEKMQFKVKTALTEEIKVDQISYG
EVTEKFKYHSDLFEGVVKDSSCDNVCENYYQEVDEDPRSTSRTVRQNISLILADPCHDSC
TNKTLTYGSHLPVHHTLGSLRTTDSNQGTEDKEQASAVETESDKVVLVCHLADVYEHQSD
IKNDQLETQESSMESENSPAAKLTETHQDLKTLSKRSFGVKRAQNLTLPAEYNGKWEPPL
RSHGFPQITLSHEPCINQTSYISGEAEVQFIPQAQQSKATRQLLYMQKTTQNQHIMPEQT
ESNVDISSNIPKSAQQKQSALEPNEQIHVERVMGADKTSEQDHKCTLALISDPRVCDASR
LSHQQRTRVLEEAEETRALVATMVYQDGTTQLDPEQKCPPAVCGVLVLLKKNLNSLVLEK
SGAAGERLLFLRLKQTPVWSQQDVKHNQDLFTREILVKMVCGTHILVCYKSKDLLRTALR
HFNKDLSWKQVASCQVLDPQIAAWLLDPADSASCFQELFKKYCSQPTSHPLTQSELRNQK
VTHVISSLSQLHRVMVELRNKLETQGLWQLYVCMEQKMMPVLAAMESHRIHVDKEALKET
SELLGTKMKQLEQQAHQTAGQKFLVSSSSQLRQVLFEKLRLHARCENKKLPKTLLKQQQS
TSEAVLLQLQDLHPLPRIVLEYRQVHKIKSTFLDGILSCTKKTYISSTWNQTSTVSGRLS
AKHPNFQALPRQPVQISKKVHSAGKEAELITVHPRTMFIAQEGWTFLSADFCQMELRLLA
HLSSDPELLRIFQNAKADVFNMLASQWKGVSEDSVSAEDREQTKRIVYSVVYGAGKGRLS
RILGVSAEEASHFQDSFLQKYKEVQAFIQCTVQHCHKYGYVKSIMGRRRSLPHIHSGDWG
IRNQAERQAVNFVVQGSAADLCKMAMIHICSLVASSTTLTPRLVAQIHDELLFEVEDSQV
EEFAVLVKKTMESLQHISCLGVSLTVPLKVSVSTGRSWGSMCEVNLPHADTTHTTV
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcccaagtcggcttgacctccagcagttacgtgagaaagataacacccttaaa
caatggggagcagaggtacaaggtgattggaggccaagagattatgaagatgatggcaat
ctgtcaggatttaatcctggtaataatatccccagtcccagaaaaagccctccagagcca
aatccactgagagaagagcttttacccgggaatgactttgttaacagaggaaccttacag
actgtcatgggattgtcaatgacacacagcaggatctcgggtagaaaggaaagaatccag
ctaatggcttctcttgaagagggtaataaagcagaggctattactcaaacccctcctctg
aagagatggaggtttgataatctgcatctacccatcacctcctgttcgaggaggtttgag
cgagatgattctgggcagaagagtgacattgtgaaagcaaatgaaaaccttgagaagatg
cagtttaaagttaaaacagccctaaccgaagaaataaaagtggaccagatttcatatgga
gaagtaacagagaagtttaaataccattcggatttgtttgagggtgtcgttaaagatagt
agctgtgacaacgtgtgtgaaaattattatcaagaagtagatgaagacccgagatcaaca
tccaggactgtacgtcagaatattagtctcatcttagctgacccttgtcacgattcttgt
acaaataaaacactaacttatggaagccatctgccagttcatcacactttgggttcactc
agaaccactgactctaatcagggcaccgaggacaaagaacaagcatcagcagtggagaca
gaatcagacaaagtggtacttgtctgtcaccttgctgacgtatatgagcatcagtccgat
attaaaaacgatcagctggaaacccaggagagtagcatggagtcagagaacagtccagca
gctaaactcacagaaacacatcaggacctgaagaccttatcaaagaggagttttggagtc
aagcgtgcgcagaacttgacccttccagccgagtataacggaaagtgggagcctcctcta
cggtcacatgggtttcctcaaatcacactgtcacatgagccctgcataaaccaaacctca
tatatcagtggagaagctgaagtgcaatttattccccaagcacagcaaagcaaagctacg
aggcaactcctatacatgcagaaaaccactcagaatcagcacatcatgccggaacagact
gaatccaacgtggacatcagttccaacatccctaaaagtgcccaacaaaagcaatctgct
ttagagccgaatgagcagatacatgtagagagagtcatgggtgcagacaagacctcagaa
caagaccataaatgtactctagccttaatctctgatccccgagtgtgtgatgccagccgt
ctctcacaccaacagaggacgcgtgtgttggaggaggctgaggaaacaagggcactggtg
gctacgatggtgtatcaggatggaaccacacagttggatcctgagcagaaatgtccccct
gctgtgtgtggagttttggttctgctgaagaagaacctaaattcacttgttctggagaag
tctggagcagctggggagagattgctgtttctgagactcaaacagacacctgtttggtct
cagcaagatgtaaaacacaaccaggatctcttcacaagagagatactggtgaagatggtg
tgtggaacccacattttagtgtgttataaatctaaagacctccttcgaacagcactcagg
catttcaacaaggatctgagctggaaacaagtggccagttgtcaggtgttggatcctcag
atcgctgcctggttactagatcctgcagattctgcctcctgctttcaggagcttttcaag
aagtactgtagtcaacccacctcacatccccttacacagtctgagctcagaaaccagaag
gtaacccatgtgatctccagcctgtctcaactacacagagtgatggtggagctcaggaac
aagctggagacgcagggtctgtggcagctctatgtctgcatggaacagaagatgatgcca
gttttagcagctatggagagccataggatccatgtggacaaggaagccttaaaggagaca
tcagagctgcttgggactaagatgaagcagttggagcaacaggctcaccagactgctggt
cagaagttcctggtgtccagcagttctcagcttcgacaggttctgtttgagaagctacgc
ctgcatgcacgctgtgagaataagaagctacccaaaaccttgctcaaacagcagcagtcc
acctcagaggctgtgctcttacaactccaggacctgcaccctcttcccagaatcgttctg
gaatacagacaggttcacaagatcaagtcaacgtttctggatggaattctgtcttgtacg
aaaaagacgtacatctcctccacgtggaatcagacgagtaccgtgagtggacgactgtct
gccaaacatccaaatttccaggctctacccaggcagccggtacagatctcgaagaaagtg
cattcagcagggaaagaggcggagctgataactgttcacccgcgtaccatgttcatagca
caagagggctggaccttcctttctgcagatttctgtcagatggagttgcgtctcttggct
catctctcgtctgaccccgagctcttgagaatcttccagaacgctaaagcagacgttttt
aacatgcttgcctctcaatggaagggtgtaagtgaggacagtgtaagtgcagaggacaga
gaacaaaccaaacgcattgtctattctgtggtctacggagctggaaaagggcgtctatct
agaatactgggtgtgagtgctgaagaggccagccattttcaggacagtttcctccaaaag
tacaaagaggttcaggcctttatccagtgcaccgtgcagcactgtcacaaatacggttat
gtaaagtccataatgggtcgccgccgttccctccctcacatccattcaggagactggggc
atccggaaccaggcagaaagacaagctgtcaactttgtagtacaaggttctgctgcagat
ctctgtaaaatggctatgattcacatctgctcacttgtggcctcttccaccaccctgacc
cccaggctggtggctcagatccatgatgagttactctttgaggtggaggactcacaggtg
gaagagtttgcagtgttggtgaagaaaacaatggagtcccttcagcatatcagttgtctt
ggagtcagtcttacagttcctctgaaggtctccgtgtctacaggaagatcgtggggctcc
atgtgtgaagtcaatctcccccatgctgataccacacacaccacagtttga
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