Tachysurus fulvidraco (yellow catfish): 113663165
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Entry
113663165 CDS
T08119
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113663165 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113663165 (sf1)
Spliceosome [BR:
tfd03041
]
Complex A
Other components
Complex A specific factors
113663165 (sf1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
zf-CCHC_3
KH_12
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
113663165
NCBI-ProteinID:
XP_027034154
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All DBs
Position
1:37225340..37235976
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AA seq
661 aa
AA seq
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MATGANATPLGKLHPSIGAKRGFDSGPGAGLMPPPGPPASFPLQNFPQMPGAAFPGFPGA
AGSLPNPQLGLPQSQLDMSLKKRKKSRWSSETPDQKTIIPGMPTVIPPGLSREQERAYIV
QLQIEDLTRKLRTGDLGIPVNPEDSRSPSPEPIYNSEGKRLNTREYRTRKKMEEERHSLI
TEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECCA
KIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMDNVKKAVEQIRNILKQGIETP
EDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKCGGAGHIASDCK
FTSTYTPRQGDPPQSAQDKARMDKEYLSLMAELGEAPIPASSGGHSNNPPSGPRGTGPNS
NQPPPNRPPWMNSGPSDNRNYHGMHGGPGGHGGPHNFPPPMPNMGGPPMPPNPNGMPPPW
MQPPPPPMGQGPTPHGHPMGLLPPPMGMMPPPPPPPNNQPPPPPSGPLPPWQQQAPPPPP
TSSMATSAPLPWQQNTTTTSTPATGNLPPWQQPQPAASSAAQPPPPMGNPSMVPPPPGVQ
PPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNFVTMMGIPGMPPFGMPPAPPPPPPQ
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagcaaacgcaaccccgctggggaagctgcacccgagtatcggcgctaaa
cggggcttcgactcggggcccggtgctggtttaatgcctccgccggggcctccagcctct
tttccgctccagaactttccccagatgccgggtgccgctttcccaggatttcccggggct
gctggttcattaccaaacccgcaactcggccttcctcaatctcaattagatatgagtctg
aagaagaggaaaaaaagtcgctggagcagtgagaccccggatcagaagaccattatccca
ggaatgcccacagttatccctcccggccttagtcgtgaacaagagcgagcttatatagtc
caactgcagatcgaagacctgactcgtaaactgcgtacaggagacctgggaatccctgtt
aatcctgaggacagcaggtctccgtctcctgagccgatctataacagcgaggggaagcgg
ttgaacacacgtgagtaccgcacccgcaaaaaaatggaagaggagagacattcactcatc
actgagatggttgggctgaacccagagtttaagccccctgctgactataagcctccagcc
accagagtcagtgataaagtgatgattccacaagatgagtatccagaaatcaactttgtt
ggacttctcattggaccacgtggcaacacgctcaagaacattgagaaagagtgctgtgct
aagatcatgatccgtgggaagggttctgttaaggagggcaaagtgggccgtaaagacgga
cagatgctcccaggagaggacgagcctctacatgccttggtcactgccaacaccatggat
aacgttaagaaggctgtagagcagatccgtaatatcctgaagcagggtattgagacccca
gaggatcagaatgacctgagaaagatgcagctaagggagctggcacgactcaatggcact
ctgagagaggatgataacaggatcctgcgtccatggcaaaattcagagcctcgtagcatt
accaacactactctgtgcacaaagtgtggaggagctggacatattgcatctgactgcaag
tttacaagtacttataccccgaggcaaggcgatccaccccagtcagctcaggataaggcc
cgtatggataaagagtatctgtctttaatggctgaactgggagaggctccaattcccgca
tccagtggtggacacagcaacaacccacccagtggcccccgtggaactggacccaactct
aaccagccacctccaaaccgtcctccctggatgaactcgggcccttcagataacaggaac
tatcatggcatgcatggcggtccaggtggtcatggaggtccccacaacttcccaccccca
atgcccaacatgggtgggccacccatgcctcccaaccctaacggcatgccccctccgtgg
atgcagccaccccctccaccaatgggccagggtccaactcctcatggacaccctatgggt
ttgttaccacctcctatgggcatgatgccacctcctccacctccacccaataatcaacca
cccccacccccatcagggcctctgccgccttggcaacagcaggccccaccccctccgccc
accagtagcatggcaaccagtgccccactgccatggcagcaaaacaccacaaccacatcc
accccagctacaggtaaccttcctccatggcagcaaccccagccagcagcaagctctgct
gcccaacctcctcctcctatgggaaacccctccatggtgccccctcctcctggagttcag
cccccactgccccctggtgccccccctcctccaccacccccaccccctggctcagcaggc
atgatgtatgcaccccctccacctcctccacccatggaccccaactttgttaccatgatg
ggaatcccaggaatgcctccatttggcatgccacctgccccccctcccccaccaccccaa
aattaa
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