Tachysurus fulvidraco (yellow catfish): 113663385
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Entry
113663385 CDS
T08119
Symbol
si:dkeyp-117b8.4
Name
(RefSeq) zinc finger BED domain-containing protein 4 isoform X2
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113663385 (si:dkeyp-117b8.4)
04121 Ubiquitin system [BR:
tfd04121
]
113663385 (si:dkeyp-117b8.4)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
113663385 (si:dkeyp-117b8.4)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113663385 (si:dkeyp-117b8.4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
ZBED1_RNase-like_helical
ZBED1_RNase-like
Motif
Other DBs
NCBI-GeneID:
113663385
NCBI-ProteinID:
XP_027034460
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All DBs
Position
26:complement(11417620..11421792)
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AA seq
889 aa
AA seq
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MEFPGRRRPVSLGTSTLRRRMDRMLPFSERRTSKVWNHYTQLSMHRVECNHCKRQLSFHN
STTSMREHLGRKHSIRDGAVPPPNTAEVPNPSALRQHIATSTLLDGRFPTSNVTMEAPTG
SFQPVVPVIVKEEQHEELSAEAGEAKHTCTTYVPGSAGVGTSNSNSLPSQDIEQSYRFSP
DELNTTLNNSGGSNNSGARGYSDKRAGLVTDLILEMVYRDLQPFSVVEERGFRLLLSCLE
PNYPVPSPSLLGNLLWHRYHILKQCLQQHLQTGLSARCLAICTEHWRSVEGCGVEGSGQF
YLTVSAHFVDSNWQLARCILETRPIPEYKGNAMNSGLAKFAYTLKAVLSEFHLPESYVFC
VVYDTPWGMECRRQGSMTLDQDYQQEFPGPSHAPIQSLPEGWEPIPCAGEALKMCVQEGL
YVETVRQALEDARGIVLHFQHDVNSAAALNQKAEAADKGAARLVLDDPGRWATAIDMCER
LLELKWVVSSVLEDQKAAPNLADHQWRLLHELVPVLRTVRIAASFLSEDINASISSLMPC
LQGVSRILGQNMTECSCPVVRGVMERIRNGMEKRWRLTDEESLLDSPAVLSSFLDPRFKE
MRFLSPHARSKLHDKVKELLSVQAYTDDREVDQDIDRGLEVRENETGGETAVLGLDDQLP
IPTVASLDSPESCASCPEEGDSIELQQNDNFVAVSSPEHINENIIVDSPSKATGGRKRTA
SLAGLSSTLACDRQLTARMRISSVPQSMYDILLGEDPTERMPEIQQQLENYIAEPLCKRS
LSPLHWWRNKEHRFPAVARLARKYLSIPATAIPAERAFAPRESPVTHRRAMLGTEYLDQV
LFLHQNCDYVEQLKGGLSGHRETEHNSGLSGNQSRDSLYQTLVSYDNKV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccgggtcgaagacggcctgttagtctcggtacatcgactctgaggagaaga
atggatcgcatgttacctttctcagaacgtcgcacatccaaagtgtggaaccactacacc
cagcttagtatgcatcgtgttgagtgtaaccattgcaagagacagctgtcctttcacaac
agcactacgtcgatgagagagcacctgggacggaagcacagcattcgtgacggagctgtt
ccacctcccaacactgccgaagtcccaaacccctcagcattacgtcaacacattgctaca
tccactttacttgatggcagattcccaacatctaatgtgaccatggaagcgccgactgga
tcgttccagccggtagtacctgttattgtcaaagaggagcagcatgaagaactatcagct
gaggcaggtgaggccaaacatacctgcactacatatgtccctggttctgcaggtgttggc
acttcaaattcaaattcccttcccagtcaggatatagaacaatcttacagattttcccca
gatgagcttaacaccacacttaacaacagtggtggcagcaacaacagtggtgcaaggggc
tacagtgataagcgagcaggacttgtcacagatctaattttggaaatggtgtacagagac
ctgcaacctttttcagttgtagaagagaggggattcagactcttgcttagttgccttgaa
cccaattatcccgttccatcaccatctttgctcgggaaccttttgtggcatcgctaccac
attctcaagcaatgtcttcagcagcatcttcaaacaggcctttctgcccgatgtttggcc
atttgcactgaacactggcgctccgtggaaggatgtggggtcgaaggaagtggccagttc
tacctcactgtcagtgcacattttgttgactctaactggcaactggcccgctgtatttta
gagactcgtccaataccagaatacaaaggcaacgccatgaacagtgggctggctaagttt
gcatacacattaaaagcagttctttcagaattccacctccctgagagttacgtgttctgt
gttgtttatgacactccctggggtatggagtgcaggaggcaaggaagcatgactcttgat
caagactatcaacaggaatttccgggacccagtcatgctcccattcagtcccttccagag
ggatgggaaccaattccttgcgcaggggaagccctcaagatgtgtgtccaagaaggactt
tatgtagagactgtcagacaggcacttgaggatgctcgtggaattgttctacacttccaa
cacgatgttaattctgcagcagctctaaatcaaaaagcagaagctgccgacaaaggtgca
gcacggctggtcctagatgacccagggcgttgggccacagccattgacatgtgtgaaaga
cttcttgagcttaagtgggtggttagctcagtgttggaagaccaaaaggctgctcctaat
ttggctgaccatcagtggcgtttattacatgaattggtcccggtgctaagaacggtacga
atcgcagcatcctttctgagtgaagacattaatgcatctatttcttccttgatgccatgc
ctccaaggtgtgtcaagaatcctggggcagaacatgactgagtgcagctgtcccgtggtc
aggggagtcatggaaaggatccgcaatgggatggaaaagcgctggagactgactgatgag
gagtctttgctcgacagtcctgctgtcctgtcatcattcctggacccaaggttcaaggag
atgcgatttttaagcccacatgctcgcagtaagctgcatgacaaggttaaagagttgtta
tctgttcaggcttacacagatgatagagaggttgaccaagatatagacaggggcttggaa
gtgagagagaatgaaacaggaggggagactgctgttttgggattggatgaccaactacct
attcccacagtggcatcactggattcccctgagtcatgtgcctcatgtccagaggaaggt
gacagcattgaacttcagcagaatgataattttgtagctgtctcatctccagaacacata
aatgaaaatataattgtggattcaccttccaaagctacgggcggacgtaaacgaacagcc
agcttggctggactgtcatctacactggcatgtgatcggcaactcactgcccgtatgcga
ataagttctgttcctcaaagtatgtatgacattcttctaggagaggatcctactgaacga
atgcctgaaatccagcagcagctggagaattacatagcagagccgctttgcaaacgtagc
ctctcacctcttcactggtggcgtaacaaagagcaccgctttcctgcggtggcccgactt
gcacgaaaatatctttcaatcccagctacagctattcctgctgagcgtgcttttgcacca
agggaatcccctgtgacccacagaagagctatgctaggaacagaatatcttgaccaagta
ttgtttcttcatcagaactgcgattatgtagagcagcttaagggtggtctttcaggacat
agagagactgaacataacagtggtctgagtgggaaccaaagtagagacagtctgtatcag
actttagtttcctatgataataaggtttaa
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