Tachysurus fulvidraco (yellow catfish): 113663473
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Entry
113663473 CDS
T08119
Symbol
arhgef28a
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 28
KO
K21072
A-kinase anchor protein 28
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113663473 (arhgef28a)
Membrane trafficking [BR:
tfd04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113663473 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
C1_2
PH_13
PHD
Ank_5
Ank_2
DUF7588
Motif
Other DBs
NCBI-GeneID:
113663473
NCBI-ProteinID:
XP_027034587
LinkDB
All DBs
Position
26:10024202..10101561
Genome browser
AA seq
1788 aa
AA seq
DB search
MELNRDEIPVYGQVEVCAVLQDPWSVQEKAEYYVLLKGSQIHHVTTAQRKEKSHLLSFTI
PGHNVAEKVSVQLYCWDESSSCNQPTLMSEELSLEYKRDTIQEVADLLISDPDNFTTSTH
VDIQRKFCPGDSIQPEQDSSDMNEQHGISTLDGESLRLNKMKKESGSHNSEETPECCEPD
PGEGFKLEPCSAVDVKITQAVSNMFSLLEWSNQKSQESQAFHHTETPLHIAVRLGLYHLT
LFYLHQSGGQEMATLPNEEGHTPAELAQSRGNAAIISALSNLLACREERPVWMSQIWADE
SHLFRSYPLTNSFVLTVKHTVYFDPQRSIQLYREKQGYVESYVQEAVLTEVEEKSRPNQT
DDASDGGLSSRTNAEDCVLLNSVFEEQLVLSLDEDEENPTTYNSEKSFCSPPGSSSPLQI
QSTDITAARITAMLNRTGKNDEQHRKCNIAAVTNDSSTTDTLPVVKVDYTKEQRPFSRTF
SPPLTPFSHTSSAGLVLDRFLRSSCHNDHDTRNAGSLAESYEISPNLVALEMDSEEEDDD
MLMKKPLPQISAENKDNGDKQDGSDPSSDLGCTRSHSASSDCNHGYQKECADQGLRLRSY
SYSSPKLSLLPPRASRDAPRPPSDLNHDGVLTSNTSGSRSLLQALSLSKSLSLLNPVKQR
ALSLTEQTQEKRELRFRRRTQSADDESSVELTDSLQHLTLSEFLKEIEEEGWDKYIIPSK
TEPEKYKVSRTFSFIKSRMYSTRSKKGKAKEKEVKEKQSSGHQFAAGPVLGTSVCEVCDK
PVTGKETLHCTNCAVCVHKGCKDSAAQCLKKVQDKYTVSMKARAATLPQNFVLRESITSS
QISPSSSLPVMTPRDRRDASTLPCNLSRSVPLVPEWLAESPEGDSDPSSWRSHGQSEELQ
QNVESSTSTDSSLVEDTVDAPLQNSLGTDALYLEAESWSLAVEPQFCQKQEKRTIKRQDV
IYELMHTELHHLQTLTIMAEVFRRGLREEVGLDAEAIARIFPCLDELIVLHRDFFSMMTE
RRNNSTQPDNEKNYLIHHVGDILLQQFSQENAENMKRVYGEFCSRHNEAVSFFKELQQQN
KRFQLFIKQQSSNSLVKRREIPECILLVTQRITKYPVLLERILQYTEDGTQEHADISAAL
SLVREMISAVDVRVSEREQSQRLSDVLGRMESKSLARLKSGAAFRKHDMTNGRTLLHHGP
LLWKTATGRLKDVLALLLTDLLVFLQEKDQKYIFAAVDQKCPVISLQKLIVREVANEERG
MFLISASSSGPEMYEVHAASKDERNTWMRLIREAVVICHEKEEDTASESEEERRAAEAKN
QKIQKLQESLYSHDQLICSSLEEKLHIYAELAAMVGHRDISPEPKLLVCPNTEELPNAAV
LLNAALKEAESLKEALSFHCGSTSCPGPLLVSEEQNNSDATPQLEAPAPASSPPPVPAEE
EPRAVDTVRSEEEESRGEDSLELQLRNQSSATDNHNMHLKVCQSVQSLTQLLYSLQAVVT
IQDSRYEVRRLLLLLLSSSTQQRISQGSLQEQERQREAERQRQELARATRERQQWTRECQ
AQHQRFEEREMELAQREQQCHEEAQRLQRQREELEEQQQEYQQSLERLREGQRSVEREKE
KVKMQQRMTERWKHERQHNTSIKLEGHQGSGDETKSFHHGHHGGLDEDGSVYVNEAVFLA
PSMNNRHLHHYQHQYQHNTHLHPGYVDSPSAQNSLNSLLALSNHTHPTISMQDEPWTEDV
GPASHTTRTAGAVGPGIYQGDALLVTQAXVSMETENQDPEGEEKIVYL
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaacagagatgagatccctgtttatggtcaggtggaagtgtgtgcagtgctg
caggatccttggtctgttcaggaaaaagctgagtactatgtattattaaaaggctcgcag
atccaccatgtcaccacagctcagaggaaggaaaagagccatttactgagcttcaccata
cctggtcacaatgtggcagaaaaggtctcagtgcagttgtactgctgggatgagagcagc
agctgcaatcagccaaccctgatgtcagaggaactctcactggagtacaaacgggacact
atacaggaagtggctgatctcctcatatctgaccctgataactttacaacaagcacacat
gtagacatccagagaaaattttgtccaggagacagtatccagccggagcaggacagttca
gatatgaatgaacagcatggcatatcaacactagatggagaaagtttaagactcaataaa
atgaaaaaagaatcagggagtcacaattcagaggaaactcctgaatgttgtgaacctgat
cctggtgaaggattcaaactggagccatgcagtgcggttgatgtgaaaatcacacaagca
gtttctaacatgttctcgctgctggagtggagcaaccaaaagtcacaggaatcacaagct
ttccaccacactgagacccctctgcacatagctgtgcgtttaggtctgtatcacctcaca
ctcttctaccttcatcagtctgggggtcaggaaatggcaacactgcccaatgaggaagga
cacactcctgctgaactggcccagagcagaggcaatgcagcaattataagtgctttatcc
aaccttttagcttgcagagaggagagaccagtgtggatgtcccaaatctgggctgatgaa
tcacacctcttcaggtcgtaccctttaaccaattccttcgtcctgacggtcaaacacaca
gtttattttgatccccagaggagcatccagctctatagggaaaaacaaggatatgtagaa
agctacgtccaggaggctgttctcactgaggtggaagagaaaagcagaccgaaccagaca
gatgacgccagtgatggaggtctgagcagccggacaaacgcagaggattgtgttctgctg
aacagtgtttttgaagaacagcttgttctttctctggatgaagacgaagagaatcccacc
acgtataattcagaaaagtcattttgctctcctccaggttccagctctccactccagatt
cagtctacggacatcactgctgccagaatcacagccatgctcaaccgcaccggaaagaat
gatgagcagcacagaaagtgcaacattgccgcagtgactaatgacagctctaccactgac
acacttcctgtcgtcaaagtggattatacgaaagagcagcgaccgttctctcgcactttc
tctccacccctcactcctttctcccacacttcttcagcaggactggtgttggatcggttt
cttcgcagcagttgccacaacgatcacgacactcgcaacgcgggatcacttgcagaatcc
tatgaaattagcccaaacctcgtggccttggaaatggacagtgaggaggaggacgacgac
atgctcatgaagaagcccctccctcagatctcggctgaaaacaaagacaacggagataaa
caggacggctccgatccgtcctccgacctcggctgcacccgctctcactctgcttcctct
gactgtaaccatggctaccagaaggaatgcgcagatcagggattacgtctccgttcgtat
tcttattcctcacccaaactcagcctgctgcccccccgcgccagccgagatgccccgcgt
cctccttctgacctcaaccacgatggcgtcctcaccagcaacaccagcggcagcagatct
ctcctacaggctctgtctctgtctaaatctctgtctcttctcaatcctgttaagcagcgt
gcgctgagcttaaccgagcagacgcaagagaaaagggagttaaggttccgtagacgcact
cagtcagccgatgacgagtccagcgtcgagctgactgattcgctacaacacctcacgctc
tccgaattcctcaaagaaatcgaagaagaaggctgggataaatacattattccttccaag
actgagcctgagaaatacaaagtcagccgcaccttcagtttcattaaaagccgaatgtac
agcacgcgcagcaaaaagggaaaagccaaggaaaaggaagtgaaagaaaaacagagcagc
ggacaccaatttgcagcaggtcctgttctggggacctcggtttgtgaagtgtgtgacaaa
cctgtcactgggaaggaaacactgcactgcaccaattgtgctgtttgcgtccataagggg
tgtaaagattctgcagcacagtgcctcaagaaagtgcaggacaaatacacagtttctatg
aaggctcgagcagcgacactccctcaaaactttgtattgcgtgaaagcatcacgtcttct
cagatatccccctcatcctccctccctgtgatgactccacgagacagaagagacgcctca
actctgccatgcaatctatccaggagtgttcctctagtcccagagtggcttgcagagagc
ccagagggagacagtgatccctcctcctggagatctcatggtcagtcagaggagctccag
cagaacgtggaatcttccacctctacagactcgtccctggttgaagacacagtggacgct
cctctgcagaacagcttggggacagacgctctgtatttggaggcagagtcatggagtcta
gcggtggagcctcagttctgtcagaagcaggaaaaacgcacgatcaagagacaggacgtc
atctacgagctcatgcatacagagctacaccacctgcaaacgctgaccatcatggcggag
gtgtttaggcgaggactgcgggaggaggtgggcttggacgcggaggctatcgctcggatt
ttcccgtgcttggatgagctcatcgtcctgcaccgtgacttcttttccatgatgacagag
cgcaggaataactccacacagcctgataatgagaagaactacctcattcaccatgtgggt
gatatcctcctccaacagttttctcaggagaatgctgaaaacatgaagcgggtctacgga
gagttctgcagccggcacaacgaagccgtcagcttcttcaaggagctccagcagcaaaac
aaaagatttcagctctttattaaacaacagagcagcaactcgctggtaaagaggcgagag
atcccagaatgcattctgttagtgacgcagcgcatcacaaaatatccagtgcttttagaa
cggattcttcagtacacagaagacggcacacaggaacatgccgatatctctgccgctctg
tctctggtgcgagagatgatttcagcagtggatgtgcgagtgagtgagcgagagcagagc
cagaggctgagcgacgttctcggccgcatggaaagcaaaagcttagccaggttgaagagc
ggcgctgcatttcgcaagcacgacatgaccaacggccgaacgctgcttcaccacggcccg
ctgctttggaagacagccaccggcagactcaaagatgtgctggctctgctgctgactgat
ctactggtattcctccaggagaaggaccagaaatacatctttgctgctgttgatcagaaa
tgtccagtgatctccttgcaaaagttgatcgtgagggaggtggctaatgaggagagaggc
atgttcctcatcagtgcctcctccagcggtcccgagatgtatgaggtgcacgcggcatcc
aaggacgagcgcaacacctggatgaggcttattcgagaagcagtggtgatttgccatgag
aaggaggaggacactgcaagtgagtcagaagaagagcgcagagcagcagaagccaagaac
cagaaaattcagaagctacaagagtctctctacagtcatgaccagctgatttgctccagc
ctggaggagaagctccacatctatgctgagctcgcagccatggtgggccacagagacatc
agcccagagccaaagctgctggtgtgccctaacacagaagagctccctaatgctgctgtt
ctgctcaacgctgcacttaaagaggcggagagtctaaaagaagctctgtcatttcactgt
ggctccacctcctgtccaggtcctctgcttgtgtctgaggaacagaacaatagtgatgct
actcctcagctagaggctcctgctcctgcgtcatctcctcctccagtgcctgccgaagaa
gaaccccgagcagtggatactgtaaggagcgaggaagaggagtcgagaggagaagacagc
ctcgagctccagcttcggaatcagagcagtgcaactgacaatcataatatgcaccttaag
gtgtgtcagagcgtccagagtttgacccagttgctttacagtttgcaggccgtggtcacc
atccaggacagccgctacgaagtgcgtcgtctccttcttctcctgctctcaagttccacc
caacaacggatctcccagggctccctgcaggagcaagagcgtcaacgtgaggcagagagg
cagcgtcaggagctggcgcgggcaacgcgggaacggcagcaatggacccgcgagtgtcag
gctcagcatcagcgttttgaagagcgtgaaatggaactggcacagcgtgagcaacagtgc
catgaggaggcccaaaggctgcagcgccaacgcgaagagctggaagagcagcagcaggag
taccagcagagtctggagaggctgagggagggccagcggagcgtggagagggagaaggag
aaggtgaaaatgcagcagagaatgacggaaagatggaaacatgaacgccaacacaatacc
agcatcaagctggaaggtcaccaagggtcaggagatgaaacaaaaagcttccatcatggt
catcacggtggcttagatgaggatgggtctgtttacgtaaacgaagcagtttttctggct
ccgtccatgaacaatcggcatcttcatcactaccagcatcagtaccagcataatactcac
ctgcatccaggttacgtggattcccccagtgcccagaacagtctaaattctctgctggct
ttgtccaatcatacacaccctacaatcagcatgcaagatgagccgtggaccgaagatgtt
ggtccagcaagccatactaccaggacagcaggagccgttggcccagggatttatcaaggt
gatgccctcttggtgacgcaagccnttgtttccatggaaacggagaaccaagatcctgag
ggagaggagaaaattgtgtatctctaa
DBGET
integrated database retrieval system
