Tachysurus fulvidraco (yellow catfish): 113663599
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Entry
113663599 CDS
T08119
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113663599 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113663599 (taf5l)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113663599 (taf5l)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113663599 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
113663599 (taf5l)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113663599 (taf5l)
STAGA complex
113663599 (taf5l)
TFTC complex
113663599 (taf5l)
SAGA complex
113663599 (taf5l)
SLIK complex
113663599 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
RMC1_N
Beta-prop_HPS5
Ge1_WD40
PROPPIN
Cytochrom_D1
Beta-prop_WDR19_1st
WD_LRWD1
WDR54
eIF2A
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
113663599
NCBI-ProteinID:
XP_027034741
LinkDB
All DBs
Position
18:15624997..15635079
Genome browser
AA seq
604 aa
AA seq
DB search
MKRGRTEQIQHAVAQYLKRRQYADMDSSLKGAKLSQSAEEMAANLMVQTESSCGNVVSAA
PCQSDPQQYETQFSRLRSFLTEAEMPLGREVSAVLFPLFLYLHLDMARCGLKGAVDAFFS
RFHSFFQQDAEQRAIVEHLRGVVTLQDVASNSKLCSLLEHKYVVQLTDEAYTYLLRFLQS
DDNSALCRVLSTHVQVEVSAVRRSDYQLCGAGLTTGNSTSMSFSGGWMGMDGTEGAESVD
VTAGSLPQNETALEALQDCIRRVREGPPSLTTVCFYAFENTEQLLNAAEVSPDSRLLAAA
FDNSALKLWSLRARKLKAGPYKANVSKIRLACDLVEEETEEEEMGSEMKTLRGHSGPVYG
AAFLRDSTGLLSCSEDCTVRYWELRGFSNTAVYRGHAYPVWDIAVSPCGLYFCTASRDTT
ARLWNPARTHPLRLYAGHLADVDCVHFHPNSSYVATGSTDRTVRLWSTQHGTSVRLLTGH
RGPVLALAFSPDGRYLVSAGEDQRLRLWDLAAGGVLKELRGHMGAITSLAFSPDSSLIAS
AAMDNSVRIWDVRNAHGGGAVSPDGSSPELVGVYTGETNSVLNVQFTACNLLLVTGTVQE
KPEQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtggccggacggagcagatccagcacgccgtggcacagtacctgaagagacgg
cagtatgcggacatggacagttcgctgaaaggggccaagctgtctcagtcagccgaggag
atggcagccaacctaatggttcagacagagtccagctgtgggaatgttgtttctgcagct
ccgtgtcagtcggaccctcagcagtacgagactcagttctccaggttacgcagctttctg
acggaggcggagatgccattgggccgggaggtgagtgccgtgctcttccctctcttcctc
tacctgcacctggacatggcgcgctgtggcctgaagggtgccgtcgatgccttcttcagt
cgattccactcattcttccagcaggatgctgagcaaagggccatcgtggagcatctccga
ggcgtcgtcacgctgcaggatgtggcctccaactccaaactgtgctctctgttggagcac
aagtacgtggtgcagttgacagacgaggcctacacgtatctgttgcgcttcctccagagt
gatgacaacagcgccctctgcagagtgctcagcacacatgtacaggtggaggtttctgct
gtgcgtcgctctgactaccagctctgcggggcggggcttactacaggaaactccacctct
atgtccttttccggcggctggatgggcatggacgggacagaaggggcagagtctgtagac
gtcacagcggggtcactgcctcaaaatgagactgccctggaggcacttcaggactgcatc
agacgtgtgcgtgagggtcctccatccctcaccaccgtctgcttctatgccttcgagaac
accgagcagctgctgaatgccgcagaggtgtcacctgacagccgcctgcttgccgccgcc
ttcgacaactccgccctcaaactgtggagcctccgagccaggaagttgaaggcggggcct
tataaagccaacgtgtccaagatacgcctcgcctgcgacctagtggaggaggagacagag
gaggaggagatggggagtgagatgaagaccctgcgcggtcacagcggcccggtgtacggt
gcggcgttcctgcgtgactccacaggtttgctttcatgctcagaggactgcacagtaagg
tactgggagctgcgaggtttcagcaacactgcagtgtaccgaggacacgcctaccccgta
tgggacatagcggtaagcccctgcggtctgtatttctgcacggcgtcacgcgacaccacc
gcacgtctctggaatcctgctcgcactcacccgctgcgactctacgccggacacctggcc
gacgtcgactgtgtgcacttccacccaaactccagctacgttgctaccggctcgaccgac
aggaccgtccgcctgtggagcacgcagcacggcacctcggtgcgattactgacgggacac
agaggccctgtactggcactcgccttctcacccgacggcaggtatctggtgtctgcaggt
gaggatcagcgcttgcggttgtgggacttggcagctggtggcgtgctgaaggaactgcgt
ggacacatgggggcaattaccagcctggcgttcagcccagacagctcactcattgcctcg
gcggctatggacaactctgtgcgtatttgggacgttaggaacgcccacggtgggggtgcg
gtgtctccggacggctccagccccgagctagtcggggtttacacgggcgagacgaacagc
gtccttaacgtccagttcaccgcctgcaacctgctgctggtcaccggcacggtgcaggag
aaacccgagcagtga
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integrated database retrieval system
