Tachysurus fulvidraco (yellow catfish): 113663743
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Entry
113663743 CDS
T08119
Symbol
slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
113663743 (slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfd02000
]
113663743 (slco1c1)
Transporters [BR:
tfd02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
113663743 (slco1c1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
113663743
NCBI-ProteinID:
XP_027034977
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Position
19:complement(2219033..2234953)
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AA seq
708 aa
AA seq
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MARNFIRENGAFLRRMDPPRKASWSPNNGITLRGQRSCCSGLKMFLVALSFAYFSKTLSG
SYMKSTITQLERRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIATGCLLMS
LGTFLIALPHFIIGRYKFETSVRSSVNSTYNITPCPASPPRMPSVGTHPSAVLNTAGCEN
ESRLSMWIYVLLGNILRGIGETPVQPLGISYIDDHALEDNAAFYIGFVQTISVIGPVFGY
LLGSLCAKLYVDIGFVNMEGITITPGDARWVGAWWLGYLIAGFITLLSAVPLWFMPKSLP
ALEGQLSNYSAEQTNFITDSHAVHHKCQADKATNFVEMAKDFLPTLRSLLGNPVYILYLC
VTIIQFNSLIGMVTYKPKYIEQHYGQSASKANFLMGMINIPAVALGMFSGGVVMKKFKLG
IMGAAKFALGTSLLGYFLSLFFFSLGCENARVAGITVSYDGTEDISMEHSSLFVSCNAHC
RCSETEWDPVCGENGLTYVSACLAGCRMSRGSGVDMMFERCSCVSEGNHTASVGQCRHRE
NCQRVFPYFLALSVITSFIISLGGTPGYMLLIRCIKPELKSLALGFHTLITRTLAGIPAP
IYYGAIIDTTCLKWGHKKCGGKGACRIYNTTAYRIAYLGLTLGLRTASFFLCVLGLLVLQ
WHVKKQKTRTLTNGNNGTELQALRKEEISNSDQSPRSSDYGPDRETRL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaatttcattagggaaaatggagcttttttgaggaggatggacccaccgagg
aaagccagttggtcaccaaacaatgggattacgttgagagggcaacgctcgtgctgttcc
ggcctgaaaatgtttcttgtagctttgtcctttgcatacttttcaaagactttatctggg
agctatatgaaaagcacaataactcagctggagcggcgcttcgacatccccagttacttg
ataggcgtcattgatggcagctttgaaataggtaacttgctggttattgcctttgtcagt
tactttggtgccaagcttcaccgaccaaaaatcattgccaccggatgtcttctgatgtct
ctagggacattcctaattgccctccctcattttattattggacgatataagtttgaaact
tcagttagatcttcggtgaactcaacatataacatcacgccatgtccagccagtccaccg
agaatgccgtctgtgggtacccacccctctgcagtgttgaacacagcaggttgtgagaac
gagtccaggttatccatgtggatttatgtgttactggggaacatcctgcgtggaattggt
gaaactccggtacagcctttgggaatttcatacatcgatgaccatgctttggaggacaat
gctgccttctacattgggtttgttcagacaatatcggtcatcggcccggtgttcggctac
ctgcttggatctctctgtgcaaagttatatgtggacattggatttgtcaacatggagggt
attacaatcacaccaggagatgcccgctgggtgggtgcctggtggctggggtacctcata
gcaggcttcatcacactgctgtcagctgtgcctttgtggttcatgcccaagtctcttcct
gcattagagggtcaactgtccaattactctgccgagcagaccaacttcatcacagactcg
cacgctgtacaccacaaatgccaggcagacaaggctaccaactttgtagaaatggccaaa
gattttttgccaacactgagatcactgctggggaaccctgtctacattctgtacctgtgt
gtaacaatcatccagtttaattctttgataggcatggtcacgtataaaccaaagtacata
gagcaacattacgggcagtcagcatccaaagccaactttctgatgggaatgatcaacatc
ccagctgttgccttaggaatgttctcaggaggagtggtgatgaagaagttcaagttgggc
atcatgggagctgccaaattcgcactgggaacatctctgttgggctacttcctgtcgctg
ttcttcttcagcttgggctgtgagaatgccagagtggccggtatcacggtgtcatatgac
gggacagaggatatctccatggagcatagctctctctttgtgagctgtaatgcacactgt
cgctgctctgagaccgaatgggacccggtgtgtggtgagaacggtctcacgtacgtctct
gcctgcctggctgggtgccggatgtctcgaggctccggagtggacatgatgtttgaacgg
tgcagctgtgtgtcagagggaaaccacaccgcctctgtggggcagtgtagacaccgagag
aactgccagcgagtattcccctacttcctggctttgtccgtcatcacttccttcatcatc
tcactgggtgggaccccaggttacatgctgctcatcagatgcatcaagccagagctgaag
tcgctggcgttaggatttcacaccctaataacacgtactctggcaggcatcccagcgccc
atatactacggtgccatcatcgacaccacctgtctgaaatggggacataagaaatgtgga
ggaaaaggagcatgtagaatctacaacactacagcctacaggatagcgtacctggggctg
acgctgggcctcaggacggcctccttcttcctgtgtgtgttaggtctgctggtcttacag
tggcacgtgaagaagcagaagactagaacgctgacgaacggaaacaacgggacagaactg
caagcgctcagaaaagaagagatcagcaactcggatcagtcgccgcggagctcagattac
ggccctgacagagagacacgcttgtga
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