Tachysurus fulvidraco (yellow catfish): 113663826
Help
Entry
113663826 CDS
T08119
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X7
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113663826 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113663826 (vps8)
Membrane trafficking [BR:
tfd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113663826 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
Clathrin
TPR_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_Vps41
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_11
zf-C3HC4
ANAPC4_WD40
EIF3I
zf-C3H2C3
Beta-prop_EML_2
WDR55
Motif
Other DBs
NCBI-GeneID:
113663826
NCBI-ProteinID:
XP_027035055
LinkDB
All DBs
Position
18:complement(12116901..12217625)
Genome browser
AA seq
1419 aa
AA seq
DB search
MSESPDTRSLVSASSQLNLMEIDAIDDKEFDIPQVDTPPTLESILNEPEDEDEPFVLEDT
CLLNTENMDAHSCETSSLASSDSGDRAHLKRRRKAVETNATVHGSVLKHNVLKGISAQLV
SAADKVDAGLPTAITVSSVIAVGTSHGLALVFDQHQALRLCLGTTATGAEYGAVSALSIN
HDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDLPTLAVCNDSGGSV
FELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHAAPELKDHPITHYCLLAMASLTKILV
IGLKPSLKVWMTFPYGKTDPASVPQLAWQFVAAQKAVNPILAFCRGNTVHFLLVKKDESG
TVHVIKQRQLQLNCDLISLTWMNPRTLVLMDSGEKLHVVDRPSQEELETLDLAEVQLVYN
SSHFKSLATGGNVSQALALVGEKACYQSVCSYGGQIVYLGTKSVHVMTLRNWRERIDHLL
KQEKFTEALSLAWSFHEGTAKAVLGLFGDPAKRKGVVADKMVEILFQYVERSLKKCPEQG
KIQLLEQHFQDMIPVVVDYCLLLQRTDLLFNQIYSRLVENSVAKGVFLESLEPYILSERI
GCLTAPVMRDLLGYFQENGMMESVEGCLVHMDITNLDIQQVVQMCWDNQLYDAMMYVFNS
GMNDYISPMEKLFQVIGPPLREGKPLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLV
PQVKNQVFEFLIRLHTLEAVKEEEVYPYIRTLLHFDTREFLNVLALTFEDFKNDKQALEY
QQRIVDILLKVMVDNSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSPDD
DSRHTERQQVLLELLQVGGMVQFDEVRLLHLAEKAEFYQICEFLYEQKHLYDRIIACYLK
DPLRKEEVYNYIHNILSMPGYSPEEKQTTWNKSLEHIKDLVSINPAKAAELVAGHFLSEV
EPIITALQDDNLVFQFLRNLLNPSDGQKTKAVMNLGPELHELLVDSMCRFSPRQVTPFLE
TSQSYRLEETIEITKKHKLHEATAYLLEKKGDVQGAFQVLLQTLKEKLNTLVHESSDPAT
LRPEGGEMEVTDEDYTPLSRVEEALSDVIALCHRSSHGLNQQQREALWFPLLEVMMSPQK
FLKGPKAKDTSDALKELTMKVLNSMSSFIALPAIIQRILQDPVYGKGKLAEIQGLILGML
ETFTYEQTLLETTTNLLNSDLHWSLAHLRKAVSRGLHPRQDHCNICLQQYKRRQESEEEI
IIFSCGHLYHCQCLQRKEQGVVGKELGLAGDRVHSWICYKCTSSQGARPGDRLLAEAGRA
RSTSLAQTKVTSVHRGSATETRHRKELTEVTLDAQQTQAWDQLRCMYRGPSRLAILTELT
QSHGSERAGLLNPAHAGTGNIYHSENLSLRLSPPPMVEE
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtctccggatactcggagtttggtgtcggcgtcttcacagctcaatttaatg
gaaatagatgctattgatgacaaagagtttgacatccctcaagttgacaccccgccgact
ttagagagtattctgaacgagcctgaggatgaggacgaaccctttgtcctggaggacaca
tgccttttgaacacagagaacatggatgcacattcctgtgagacatcctccctcgcgagt
tccgacagtggagaccgtgcacatctaaagagaaggaggaaggcagtagagaccaatgct
acagtccacggctcagttctgaaacacaatgtgctgaaaggcatctcggctcagctcgtc
tccgctgctgacaaagttgatgcaggcttgccaacagcaatcactgtatccagtgttatc
gccgtgggaacgtcacatggccttgctctggtctttgatcagcaccaggcgctgaggctg
tgcttgggtaccacggcgacgggagcggagtatggtgcagtgtctgctctcagtattaac
catgactgcacacgtctgctgtgtggctttgctaaaggacaaattaccatgtgggatttg
gctaacgggaagctcctgcgcaccatcaccgatgcccacccacctggcacggccattttg
cacgtcaagttcacagatctaccgacgcttgctgtgtgtaacgacagcggcgggtctgtc
tttgaactatcattcaggagggtgatggggatgaggacatgtgagtctcggtgtttgttc
agtggcagtaagggggaggtgtgctgcgttgagccgctgcatgcagcccctgagcttaaa
gaccatccaatcactcactactgcctgctggccatggcctcactcaccaagatactagtg
atcggactgaagccgtctctaaaggtctggatgacttttccatatggcaagacagaccct
gccagcgtgccccagttggcatggcagtttgtagcggcacagaaagcagtgaaccccatc
ctcgccttctgtagaggaaacactgtccacttcctgctggtgaagaaggacgaatctgga
acggtccacgtcatcaaacagcgacagctccaactcaactgtgaccttatcagtctgaca
tggatgaatcctcggacactggtgttaatggacagtggagagaagctgcacgtggtggat
cggcccagtcaggaggagctggaaactctggacctggccgaggtgcagctcgtctacaac
agcagtcattttaaatctcttgctacagggggcaacgtcagccaggctctggctttggtg
ggagagaaggcgtgttatcagtctgtgtgcagctacggaggccagatcgtctacctggga
acaaaatctgtccatgttatgactctcagaaactggagagagcgcatcgatcatttactg
aagcaggagaagtttaccgaggcgctctctttagcctggtctttccatgaaggcacagct
aaagcagtattgggtctgttcggtgaccctgccaaacggaagggagtggtggctgacaag
atggtggagatcttgttccagtatgtagagcgatcgctaaagaagtgtcccgagcaaggc
aagatccagctgctggagcaacacttccaggacatgattcctgtcgtggtggattactgt
ctgctcctgcagaggacggacctgctgtttaaccagatctactcgaggctggtggagaac
tcggtggctaaaggcgtcttcttggagagtctggagccgtacattctgagcgagcggatc
ggctgcctcacggctcccgtcatgagggacctcctcggttacttccaagaaaatggtatg
atggagagtgtggagggctgcctggtgcacatggacatcaccaacctggacatacagcag
gtggtgcagatgtgttgggacaaccagctgtacgatgccatgatgtacgtgttcaacagt
ggcatgaacgattacatcagccccatggagaagctctttcaggtgatcggtcctcctctg
cgagaaggcaaacctctcacagatgaacaggttgtcatgggaaataagctgcttgtctac
attagttgttgtctagcaggacgagcctatcctttaggggacattccagaagaccttgtg
ccacaagttaaaaatcaggtgttcgagttcctgattcgtctgcatacattagaggccgtc
aaggaggaggaggtgtatccgtacatccggaccctgctgcacttcgacacacgcgagttt
ctcaatgttctggcgctgacgttcgaggattttaaaaatgacaaacaggctttggagtac
cagcaaaggatcgtggacattttactcaaggtcatggtggataactcagacttcacccct
tcccaggtgggctgcctgttcacctttctcgctcggcagcttgccaaaccagacaacacc
ctcttcgtcaacaggaagttgtttgatcaggttctggagtttctgtgcagtccagatgac
gactccagacacacggagaggcagcaggtgctgttggagttgctgcaggtgggaggcatg
gtccagttcgacgaagtacgactcctccacttggcagaaaaggcagaattctatcagatc
tgtgagtttttgtatgagcagaaacatctgtatgaccgaatcatcgcctgctacctgaag
gaccccttaagaaaggaggaggtttataactacatccataatatcctgtccatgcctggc
tacagtccagaggagaaacagaccacatggaacaaatccttagagcacattaaggacctg
gtcagtattaaccccgctaaagcggccgagctggtggctggtcactttctcagcgaggtc
gagcctatcatcactgcactacaggatgataatttggtcttccagttcctgagaaacttg
ctgaatccaagtgatggacagaagactaaggctgttatgaacctggggcctgagctccac
gagctcctggtggactcgatgtgccgttttagtcctcgccaagtcaccccgtttctcgag
acctcccagagctaccgtctggaggagaccattgaaatcaccaagaagcacaagctccat
gaggctaccgcctacctgctggagaaaaagggagatgtgcagggagcctttcaagtgctg
ctacagacactgaaggagaagctgaacacactcgttcatgagagttcagatccagccacg
ctgaggcctgaaggaggggagatggaggtgactgatgaagattacaccccactgtccagg
gtggaggaagcccttagtgacgtcattgcactgtgtcaccggagctcacacgggcttaac
cagcagcagagagaggctctctggtttcctctccttgaggtgatgatgtctccacagaaa
tttctcaaaggccctaaagccaaggacacttcagatgcactaaaagagctcaccatgaag
gtgttaaacagcatgtccagcttcatcgccctgcctgccatcatccagcgcatcctacag
gaccctgtgtacgggaagggaaagttagcagagatccagggcctgattctgggcatgttg
gaaactttcacctacgaacagaccctgttggagaccactaccaatcttctgaattcggac
ctgcactggtctctggctcacctgcgtaaggccgtcagcagaggactccaccctcgacaa
gaccactgcaacatctgcctgcaacagtacaaaaggaggcaagagagtgaggaggagatc
atcatcttcagctgtggtcacctgtatcactgtcagtgcctgcagcggaaggagcaaggg
gttgtgggtaaagaactcgggctcgcaggagatcgggttcattcgtggatctgttataaa
tgcacgtccagtcagggagctcgtccaggagaccggctgctcgccgaggcaggacgagct
cgatccacctctctggctcagaccaaagtaacatccgtccatcggggatccgccaccgag
acccgtcacagaaaggagctgactgaagtgacactggacgcccagcagacacaggcatgg
gatcagctgcgctgcatgtacagaggaccctccagattggcgatccttacagaactcacg
caatcccacggcagcgagagggccggcctgctgaaccccgctcacgcaggaacaggaaac
atctaccacagtgaaaacctcagcctcaggctttctccaccgccaatggtggaggagtag
DBGET
integrated database retrieval system
