Tachysurus fulvidraco (yellow catfish): 113663836
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Entry
113663836 CDS
T08119
Symbol
poll
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03410
Base excision repair
tfd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113663836 (poll)
03450 Non-homologous end-joining
113663836 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113663836 (poll)
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113663836 (poll)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
113663836 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
113663836 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
BRCT
BRCT_2
HHH_5
LIG3_BRCT
NTP_transf_2
PTCB-BRCT
Cdd1
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
113663836
NCBI-ProteinID:
XP_027035069
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All DBs
Position
18:complement(13091239..13097829)
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AA seq
554 aa
AA seq
DB search
METHGIMKAFPKVKRHRSNETKDAPAVKKPSGLPITGNIFQGVCIHIVPVGIGNARRDIF
QQQIVQNGGQVEAAYGPSCTHVVVDESVDRERASRLLKMETFPPAVQLVKCTWLSACITE
KKLVSTEDYSLQKCDRPQDAPAEKPKLSVVSCIPVPEEKQPPDHKSAQDDPADMVPETQE
EPLEEDAVSQNDLEALISGVKHDPGTSEASEKTEVLGKWVCAQSSRTKSKNHNDHITDKL
EQLAKAYTHMGDKWRALSYSKAINALKSHPKAITSYEEAYKIQGIGKSMANKIVEIMESG
HLRKLDQFGEAMPVLETFTNIWGVGAKTAKLWYQQGFRTLEDIRTKATLTHTLRIGLKHY
DDFLDRMPRSEAAAIEKTVREAAHSVNPELLVVACGSYRRGKPTCGDVDVLITHPDGQSH
KGVFSKVLQVLHQSGFLTDDLVSHEDNGEQKKYMGVCVLPGSGQRHRRLDIIVVPHDEFA
CALLYFTGSAHFNRSMRALAKTKSMSLSEHSLTAGVVRERGVKVVPGLPLSTPTERAVFE
HLGIPYREAHERDW
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcatggtattatgaaagccttcccaaaagtgaaaaggcatcggtcaaatgaa
actaaagatgccccagcagttaagaaaccctcaggtctacctattactggaaacatattt
cagggtgtctgcatccacatagtccctgttggcataggtaatgcccgtcgtgacatattt
cagcagcagattgtgcagaatggaggccaggtggaagctgcttatggtcccagctgcaca
catgtggtcgtggatgagtcggtggacagggagcgagcgtccaggctcctgaagatggaa
acctttccccctgctgtgcagctggtaaaatgcacttggctcagtgcttgcatcactgag
aagaagcttgtgagcacggaagactacagtctgcaaaagtgcgaccgtcctcaggatgct
ccagctgagaagccaaagctgagcgttgtcagctgcatccctgttcctgaggagaaacag
ccaccggatcacaaatcagctcaagatgatccagctgacatggtgcctgagactcaggaa
gaacccctagaggaagacgctgtctcacaaaatgacttggaggctttgatcagcggggtt
aaacatgatcccggcacctcagaagcatccgaaaaaacagaggtgttgggaaagtgggtg
tgtgcccagtcgtctcgaaccaagagcaagaaccacaacgatcacatcactgacaagctc
gagcagctagccaaagcatatacacacatgggtgacaagtggagagcgctgagctactcc
aaagccattaacgcgctcaagagccatcccaaggcgatcacttcatatgaggaagcctac
aagatccaaggcatcggcaagagcatggccaataagattgttgagatcatggagagcggg
cacttgaggaagttggaccagttcggagaggccatgcctgtcttggagacattcaccaac
atctggggtgttggcgcaaagaccgccaagctttggtaccaacaggggttccgtacactg
gaggatattcgcaccaaggccactttgactcacacgctgagaattggcctgaagcactac
gacgacttcctcgatcggatgccaaggagcgaggcagccgccatcgagaaaacggtgaga
gaggcagcacacagcgtgaacccagagctgctggtggtggcgtgcggctcgtaccgacgc
gggaagcccacctgtggagatgtggacgtgctcatcactcaccctgacggccaatcacac
aagggcgtctttagtaaagtgctccaggtcctccatcagagtggcttcttgactgatgac
ttggtgagccacgaggacaacggcgagcagaagaagtacatgggcgtatgcgtcctccca
ggctcgggtcagcgccatcggcgactcgacatcattgtggtgccacatgatgaatttgca
tgtgctttactttacttcaccggctcagcccacttcaatcgatccatgcgcgcacttgcc
aagactaagtccatgagtctgtcagaacactcgctgaccgccggcgttgtgcgcgaacgt
ggcgtgaaggtggtaccaggtttgccgctgagcacacctactgagagggcagtctttgag
cacctgggaatcccatacagagaggctcatgaaagagattggtaa
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