KEGG   Tachysurus fulvidraco (yellow catfish): 113663854
Entry
113663854         CDS       T08119                                 
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
  KO
K12897  transformer-2 protein
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113663854 (tra2b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tfd01009]
    113663854 (tra2b)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tfd03041]
    113663854 (tra2b)
Protein phosphatases and associated proteins [BR:tfd01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113663854 (tra2b)
Spliceosome [BR:tfd03041]
 Common components
  Common spliceosomal components
   SR proteins
    113663854 (tra2b)
SSDB
Motif
Pfam: RRM_1 FMP27-BLTP2_C RRM_occluded RRM_3 NPR3
Other DBs
NCBI-GeneID: 113663854
NCBI-ProteinID: XP_027035098
LinkDB
Position
18:complement(12287664..12294442)
AA seq 301 aa
MGSSCSFSFVLIWFGFVQESRSRSVSPRGSVKSTSNSPGRSKDGSHRSRSRSKSRSRSRS
KSRSRSRSHRSSRRRHSRSRSRRRHSRSRSYSREYRRSRSHSPMSNRRRHVGNRANPDPN
CCLGVFGLSLYTTERDLREVFSKYGPLASVTIVYDQQSRRSRGFAFVYFENEEDSKEAKE
QANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGSGGGGSGGGGGGGGGRQST
SSSRSRDYYDRGYDRGYDRGYDRYDDREYYKSYRRRSPSPYYGRGGYRSRSRSRSYSPRR
Y
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggaagttcttgctctttttcttttgtgctcatttggtttggatttgtgcaggagtcc
cgctctcggagtgtgagtcccagaggctctgtgaaatcgaccagcaattcaccaggaaga
tctaaggatggttctcaccgctctcgctcccggtccaaatctcggtctcggtccaggtcg
aagtccaggtccaggtcccgttcacacaggagctctcgacgtcgccattctcgctcacgc
tctcgaaggcgccactctcgtagccggtcgtacagccgagagtacaggcgcagtcgcagc
cactcacccatgtccaatcgcagacggcatgttggcaaccgggcaaaccctgaccctaac
tgttgcctgggtgtgttcggcctgagcctgtacaccacagagcgagacctgagagaggtg
ttctccaaatacggccccctggccagcgtcaccattgtttatgaccagcaatctcgccgc
tcgagaggctttgcctttgtctactttgagaatgaagaggactccaaggaggctaaagag
caagctaatggcatggagctggatggacggcgtatcagagtggacttttccattactaaa
agaccacacacccccacacctggaatttacatgggacggcccacctatggtggtggtggc
ggcagtggaggtggcggcagtggaggaggaggtggtggaggaggaggaagacagagtaca
tcctccagccgctccagagattattatgatcggggctatgaccgcggctacgatcgagga
tatgaccgttacgatgatcgagaatactacaaatcctacaggcgcaggtctccttcgccc
tactacggtcgtggaggatacagatcccggtcccgctcgcgttcctactccccaaggcgc
tactga

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