Tachysurus fulvidraco (yellow catfish): 113663979
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Entry
113663979 CDS
T08119
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113663979 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113663979 (taf6)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113663979 (taf6)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113663979 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
113663979 (taf6)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113663979 (taf6)
STAGA complex
113663979 (taf6)
TFTC complex
113663979 (taf6)
SAGA complex
113663979 (taf6)
SLIK complex
113663979 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
ILVD_EDD_N
CBFD_NFYB_HMF
CENP-S
Motif
Other DBs
NCBI-GeneID:
113663979
NCBI-ProteinID:
XP_027035339
LinkDB
All DBs
Position
26:157193..166609
Genome browser
AA seq
621 aa
AA seq
DB search
MAEERRQKACSVLFSTESMKVMAECVGVSQLQEESCVALSEEISYRIKEITQDAVKFMHH
GKRRKLTTSDIDHALKLKNVEPLYGFQTQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPAIPENPPPVSKEQQKTESSEPLKAVKPGQEKDGAIQN
KTQGASSAEVKGKEKLRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMMKALMDNPTLYLEKYLHELLPAVMT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKAWLDDKTHW
TTRYGCIAGLSELGPDVIKTLIIPRLSVEGARIKSVMEGPVVSNIDKIGADHVQSLLLKH
CASVICKLRSAPDVVDQYRADYGYLGPMLCSHVIKARAQNVLQSQSVNRTTLTITQSRPS
LSVSQSSLSSVTGSRTPSIIKVPSSLTLMSTRPATPTQPSPPATKYIVMATSAGPASTQQ
VITLSSSQSSSPVTSTVPSVSTPLQPLVKLESGVTGVSGSRPVQKYIVVSLPSSSSSLEK
SSTSPISTESKPEHTDTHMTG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcgaaggcagaaggcttgttctgtgctgttctccaccgagtcgatgaag
gtgatggcagagtgtgttggagtttcccagctgcaggaggagagctgtgtggccctgagt
gaggagatcagctacaggataaaagagatcactcaggatgcagtgaaatttatgcaccat
ggcaaacgacgcaaacttacaacaagtgacattgaccacgctctcaaactgaagaatgtg
gagcccctatatgggtttcagactcaggagtttattccatttcgctttgcgagtggtgga
ggacgtgagcttcacttttatgaagagaaggaagtggacctgagtgacatcatcaacacg
ccccttccacgtgtgccccttgatgtctcacttaaggctcactggttgagtattgatggt
gttcagcctgcaatcccagagaacccacctccagtatctaaggagcagcagaagacggag
tcatcagagcctctgaaggctgttaaacctggacaggagaaggatggagccatccagaat
aagactcagggtgcctcttctgcagaggtcaaaggaaaggagaagctgcgtctgaagcct
cgcagtacacacgagctctctgtggaacagcagctgtactataaagagatcactgaggcc
tgtgtggggtcctgtgaagccaagagagctgaggcactgcagagtatagccacagatccg
ggtctgtaccagatgctgcctcgtttcagcaccttcatctctgagggggtgcgtgtgaat
gtggttcagaataatctggcattgctgatttacctgatgaggatgatgaaggctctgatg
gataaccccaccctctacttggagaaatatctgcacgagctcctccctgcagtgatgaca
tgtatagtaagtaaacagctgtgtctgaggccagatgtggataatcactgggctctcagg
gactttgcagctcgtctcatggctcagagctgcaaaacctttagcaccaccaccaacaac
atccaatctcgtatcaccaagaccttcaccaaggcatggttggatgataagacccactgg
acaactcgttatggttgtattgctggtctttcagagcttggccctgatgtcataaagacg
ctgataatccctcgtttgtcagtggaaggtgctcggattaagtcagtgatggagggacct
gttgtgtccaacattgataaaattggtgctgatcatgttcagagtttactgttgaagcac
tgtgcgagtgtgatctgtaagctgcgttcagctcctgatgtagtggatcagtaccgagcc
gattacggttatttggggccgatgctgtgttcgcatgtcattaaagctcgagcacagaat
gtcctgcagagtcagagtgtgaacagaaccacactgaccatcacacagtccagaccgtct
ctgtctgtctctcagagcagtttgagcagtgtcacaggatcacggactcccagcataatt
aaagtacccagctctctcacgctcatgtccactcggccagccacacccacacagccatcg
ccaccggccaccaaatacatcgtcatggccaccagtgcaggccccgcctccacacagcag
gtgataacattaagctcctcccagtccagctctcctgtcaccagcacagtgcctagtgtc
tccaccccactgcagcctcttgttaagctggagtcaggggtcactggggtctcagggtca
cgacctgtacagaagtatatagtagtgtctttaccttcttcatcatcatcattggagaag
agcagcacatcaccaatcagtactgagagcaaacctgaacatacagacacacacatgaca
ggctga
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integrated database retrieval system
