Tachysurus fulvidraco (yellow catfish): 113663983
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Entry
113663983 CDS
T08119
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113663983 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113663983 (taf4b)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113663983 (taf4b)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113663983 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
113663983 (taf4b)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113663983 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
ISG65-75
Motif
Other DBs
NCBI-GeneID:
113663983
NCBI-ProteinID:
XP_027035351
LinkDB
All DBs
Position
16:7061130..7073497
Genome browser
AA seq
843 aa
AA seq
DB search
MSVMSKSENENDVKRPDDSLEDASPAPCTQVSDKHNAQDATSASQPSAKESVFTQESKTQ
TLGPPEALKNPSAEAEGRPSGMLNNPVTFTVTSASMTPTQNAIVSSVPVRSATPLVVGAR
MVSTAGASGQTSASHPGGLTVTSNQIRPPPVTQTPLRAAIVALPRTSQQNVTVPRSPQTT
SLQLPANFQIPQGMVLIRSDSGQLMLVSQQALAQAQAQGFVPKTSSVTTAVRPPASQATA
TSIIRVSVPSSSTTVATLVKPTSSTVKAVLKPSSTMATTIIKPTTTGSTIIKSPSVLGTG
IKPNTITGPTVIKVTSAQKPPISNTTGTISQRTINVPSTSVVTSIGKASLSTSVSQSIRP
VAIGPRNISPNIPIKASSNSKVSNPATVTTETLENVKKCKNFLITLMKLASSGTRSPDMA
QNVRALVKDLLDGRLEAEEFTEKLYMELKSSPQPYLVPFLKRSLPAVRQLTPNSQLFIQQ
SEQTKASSSSTISSSAQKLSITSSTTFSQPLRGSVSARPAQMVIQQSKGVIVEQRVTSSS
HVVLPVQNHTQAKQPVIQTNTQAAGDFRKLSLQACKTPSGPTQAAQAHNFKNSTSGLFRD
DDDINDVASMAGVNVNEENARILSFSSELVGTVVRSCRDEPFLQTTALQQRVLHIGKSLG
VAEVNPDVLELLSHATQERLRNLLEKLTVIAHHHNISYRDDWWNIQTSDTRAQLKFLEQL
EKVEKQRREEEEKETLLRIAKSRSSCEDPEQLRLRQRAKEMQQQELAQMEHRDANLAALA
ALGPRKRKPVEASGSGTNQVLSLRAQRTSQRPPTRVTFRDLIFCMEQDRALRHSLTLYDA
FLR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcatgtctaaaagcgaaaatgaaaacgacgttaaaagaccagacgattcgtta
gaagacgcttcaccagcaccgtgtactcaggtgtcagataaacacaacgcacaagatgct
accagcgcgtctcaaccttcagccaaggagtcagtgtttacacaggaaagtaaaactcag
acactaggaccacctgaagcacttaaaaacccttctgctgaagctgaaggtcgaccatcg
ggtatgctgaacaatcctgtgaccttcactgtaacatctgcctccatgactccaacacaa
aatgccatagtgagctctgtgcctgtgagatctgccacgccgctggtggtgggggcgaga
atggtgtcgacggctggggctagtggacaaacctcagcatcacatcctggaggactcact
gtaacgtctaaccagatcagacctccaccagtgacccaaactccgcttcgagcagcgatc
gtggctttaccgaggacttcacaacagaatgtaaccgtgccacggagccctcagacaaca
tctcttcaactacctgctaacttccagattccacaaggtatggttttaattcgcagcgac
agtgggcagttgatgctggtttcccagcaggctttggctcaagcacaggcccagggcttt
gtgcccaaaacatcaagtgtcactacagctgtaagaccaccagcctcccaggcaacagct
acatctatcatcagagtttctgttccatcttcatctacaacggtagccaccttggtaaag
cctacctcctctacagtaaaggctgttttgaagcccagctccaccatggccactaccata
atcaaacctaccactacaggaagcacaattattaaatccccctcagtgttagggactggc
attaagccaaacactatcacgggacccaccgtcattaaagtcacctctgctcagaaacct
ccgataagcaacacaacaggaaccataagccaaaggactataaatgttccctctacatct
gtagtaacgtctattggcaaagcatcactttctacatcagtttctcaaagcatccgccca
gttgccattggacctcgaaatatttccccgaatattcccatcaaagccagcagcaatagc
aaagtctccaatccagctactgtcacaaccgagacattggagaatgtaaagaaatgtaaa
aactttctgatcactctaatgaagctggcatcgagtgggacccgttcacctgacatggca
cagaatgtccgagctctagtcaaagacctgctggacggaagacttgaagcagaggagttc
actgaaaaactttacatggagctgaaatcatccccgcaaccatacctggtgccctttctt
aaaagaagccttccagctgtgcgtcagctcaccccaaactctcagctcttcatccagcag
agtgagcagaccaaagcatcatcttcatccacaatcagcagcagtgcccagaaactcagc
attacctcctccaccacgttctctcagcctctccgaggcagtgtatcagccagacctgct
caaatggtgatccagcaaagcaaaggagtgattgtggagcaacgtgtgacctcttcatcc
catgttgtcttgccagtgcagaaccacacacaggccaagcagccagtcattcagacaaac
acacaggcagcaggagattttaggaagctttcactccaggcatgtaaaaccccctctgga
cctactcaggcagcacaagcacacaatttcaagaacagcacctcaggcttattccgtgat
gacgacgacataaatgacgtggcctccatggcgggtgtaaatgtgaatgaggaaaacgct
cgcattttgtcattcagttcagagctggtgggaacagtggtgcgctcatgcagggacgag
cctttcctccagaccacagcactgcaacagagagtgcttcacatcggtaagtctctgggt
gttgcagaggtgaatccagatgtgcttgagttgctttctcatgccacacaggaaagactt
cgcaatctgctggaaaaactcactgttatagcacatcatcataatatctcttacagggat
gattggtggaacattcagaccagtgacactcgagcccagctaaagttcttggaacagctg
gaaaaagtggagaaacaaagaagagaagaagaggagaaggaaaccctgttgcgcattgct
aagagtcgctcgagctgcgaggaccctgaacagcttcggctccgacagagagcgaaagag
atgcagcagcaagagctagctcagatggagcacagagatgctaacctggcagcactggca
gctctggggcctcggaagaggaaacctgtggaagcttcaggctcagggactaatcaggtt
ctgagtttacgtgctcagagaacgtctcaaaggcctccaacacgtgtcactttcagagat
ttgatcttctgcatggaacaggaccgtgcacttagacactctcttacactgtatgatgct
ttcctacgttaa
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