Tachysurus fulvidraco (yellow catfish): 113664049 Help Entry 113664049         CDS       T08119                                  Symbol setx Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism tfd  Tachysurus fulvidraco (yellow catfish) Brite KEGG Orthology (KO) [BR:tfd00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tfd03021]     113664049 (setx) Enzymes [BR:tfd01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      113664049 (setx)     5.6.2.5  RNA 5'-3' helicase      113664049 (setx) Transcription machinery [BR:tfd03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      113664049 (setx) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SEN1_N AAA_19 Viral_helicase1 UvrD-helicase AAA_30 AAA_22 AAA_16 GLF TniB TIP49 SLFN-g3_helicase NPHP3_N UvrD_C_2 Motif Other DBs NCBI-GeneID:  113664049 NCBI-ProteinID:  XP_027035457 LinkDB All DBs Position 21:15667883..15692555 Genome browser AA seq 2340 aa AA seqDB search METCRWCTTSPENDVAVKEVLKRYCTGEMTQKEMHDANSDFIYCLECVVRYHRAREMVPE LHKRLWELETTRLLEVFREMLEADLEDDDLYFVEKGYNLPVSNVTPEEFHNRLRFPLVEV LKYPYLLCHQELCEMVVNVLCKMEDMKNPLPVHDQYQGTYLLMVHPNETVRRWAIATARS LGRVDRDNYYDLQEVFACMFYVIDLGITVDFLSTDDSYCSGKLKMLQPHLFDSKNKKSYW LGICMLLMQLDSQAMDSLLMGPEGQSSIPQCIINTMNDSNKDDDLDPFWPALHCFLVILD RLGSKIWGQIEPLDAFKAITKAGSYMAKIENIREQTARTRVKVEPENHDDLLSCSQIVYD CYTAERASRSSDCSSDNSDTSGNAIFEEMSCLVNVLQSEMGQGMRVYGSTFLWFIPFVRS LMELNELNSICVGEVIHYLENNVDKNVLSGRTQTCDKVTEFFIRILVDLIKLHMNNGYME RLSYFTHIWVDMVMQCATLSDDFCNTRGVHSTSHFGRGNVMPAVGVGAMSQDCMKLIRSM LKEGGRTGTDPESAHFLDLINRHLRFFSSKGWNLSKSEYDNLKKCLLRLVKVITERPKVS NDVLPCAPPTPPSDPSENVISYPNSTVTLPLQQVQTKDAEVGPCGPVGNSIKEEPLWNHE ECQSFCDGHEEIIKVKKEPYNPMPISESRPMEGLRIVAPGKVQEIKSMLAHKNFSTKQTI VKGRLKTEDEQGNCSGLKEIGHASSVSPQPSTSQSKIPDSARLSKSSKDKSDDDEPLDVR RRRLKRSKKSSEEDSDDVRQISVQLSSTAKQIHPSSINIISDHRVSSSDNKLLENRVTRD TLVDLDSKSPGRDFDDLSESQVFEFETQAHMVSSWNEPHIDITDVSKKHKLQYDSKAYSS HDAVEPMDTQPISDEDIEKACLQVEVQICKEQRPQEPISSGTRVPPKPSSNEKRDFIQHS KSQTEKSIPTDKGKRWPCKKPPVIAALSQKIKKRSHDTISKDLVKPCSSTMLTSSSVTIA PSRGTSASSVAPLRSTPAVVPTKKVRKRVEPELPEELLGLKKKERKAFDFSQRSLVTLGE LRSHGQNVHVDAQPKSKRIRKQKVVVKKGKKLLASQDLQYFRQSRSMLEKATSAAPVAAK SYQRPVPETLPKLKPATETMEEPRDEEDDYYFLPCSQPDPERRMDNKLGTTEVNTSNAND SKNTVRDWDENNKSKEFSSLQNNKCGSMAEGKESRDENGHGGDHYDDEWMSFTQNEPTDM ELCSQMEQMEYAENLIITGSVHMDNDAGKHSNISEAEPSASLKPASCNTIQKSLPDASSA TTSNDPLLIKPSTLTECQKKAKPPTKIYTSCSRSASLAKEMGKVANPLPAANVTKAKVVR APPPAMPPPPAMPPPPAMPPPPAMPPPPAMPPPAIPKSTPQHEFSQPIPPRPILHTTNQV SKPSFNVTFAPHVPSYKTYSRPEMPVPVRTPTIDQSRKFDNSPMYDQSYLKQAILKWEYL MFENYKAFGTPQDLCPLALKEVPTTFSSYTEYFNAFYPLLLINTFEEMVSEWLNGRKIEI SLKVQGIEYRNRIATASFTASLNAEQEAKQLYPKDDDLVLLWLPENTGAYANDEPDFPEI SVHFGCVLRSSVLSNGGGHLSTLNLTIQTRGNVASINTQDVRCERIGSLISTLREFRALC LLQKSKMAHPILKPDIKFYTPCDGLPILDMPEYNAEQTKAISCGVAMVKRKQNTPKILLI HGPPGTGKSKIIVGMLHRLLSDAESPSVTRYAKSRRPRILLCAPSNAAIDNLMKKIIIAF KEKCLDIRAPQGNCGDINLVRLGSERTISKELKLFSLDCQVKKGLEKAQQKHDFDIQRMK EELDKKLETLSQQCAKTDKKSARFEQLNERKLFYLREREKLSQKLKELRNKKQAVQSRIL IDAHVICCTLSTSGGGLLESAFRRLGHEPFCCVIVDEAGQAKETETLIPLLYRCQNLILV GDPMQLPPTVVSQRAKELGYDQSLMARVWKSLYYQNTQLSPSIFLRVQYRMHPNICEFPS KYIYDHNLKSDPETAQKLCSSSWPFEAYRVFDVTDGKESKERDSFSNCKEVKLVVLLYKL LGENHAKRKEKQPMRVGIITPYNAQKQRIQQALEKDTDKELKKYIHVEVDTVDGFQGRET DCIIVSCVRASNENGSIGFVANRQRMNVTITRAKSSLFILGHLRTLQEHSDWGALVQDAV KRGATITVTESTSHKFVQKVLKPIHPPRRYSHPPSLMSNPAYSDGQRDHRTHARPSDPRL QLPFPASSEHDGGNQSFSRPRPHSRRASDACLDQSSGRSFHMTLERHQEPHFSSSRAPRK NT seq 7023 nt NT seq  +upstreamnt  +downstreamnt atggagacttgtcggtggtgtaccacatcccccgaaaacgatgtggccgtcaaagaggtc ctaaagcgctattgcaccggtgaaatgacgcagaaagaaatgcatgatgctaatagcgac ttcatctactgtctagagtgtgtggtgaggtaccacagagcaagagaaatggtcccggaa ctgcacaagcgtctgtgggaattggagacgacacggctgcttgaagttttccgggaaatg ttggaggccgatctggaggatgatgacctgtactttgtcgaaaaaggttataacctgcct gtctccaatgtcacacctgaggaatttcacaaccggctgagattcccgcttgtggaagtg ctgaaatacccttaccttctgtgtcaccaggagctctgtgagatggtagtgaatgtgttg tgcaaaatggaggacatgaagaaccctctgccagtgcatgaccagtatcagggaacctac ctgctcatggtgcaccccaacgaaacggtgcgtcgctgggcaatagctactgctagatca ttgggcagggtggacagagataactattatgatcttcaggaggtctttgcctgcatgttc tatgtcattgatttaggaatcactgtggactttctaagcacagatgactcctactgctct ggcaagctcaagatgctacagccacatctctttgactccaaaaataaaaagagttactgg ctaggtatctgtatgttgctgatgcagctggactctcaagccatggactcgttgttaatg gggccagaagggcagtctagcattccccagtgtattatcaataccatgaatgactctaat aaagatgatgacctagatccattctggcctgctttgcactgtttcttggtcattctagat cgactgggctcaaagatctggggtcagatagaaccactagatgctttcaaggccatcact aaagcaggcagctacatggctaaaattgaaaatattcgagagcaaaccgcaaggacaagg gtgaaagtggagcctgaaaatcatgacgatctgttgtcatgcagtcagattgtgtatgac tgctatactgcggagcgagcaagtcgatcatcggactgttcatctgacaatagtgacaca agtggcaatgcaatctttgaagaaatgagctgcctagttaatgttttacagtctgaaatg ggccaaggcatgcgtgtatatggtagcacctttctttggtttattccattcgttcgctcc ctcatggagttgaatgagcttaatagcatatgcgttggggaggttatccactacttggag aacaatgtcgacaagaatgtgctctctggaagaacacagacctgtgacaaagtgaccgag ttcttcatccgcatccttgttgatctaattaaactgcacatgaataatggctacatggaa agactgtcctattttacccatatatgggtagatatggtgatgcagtgtgctacactttct gatgacttttgtaataccaggggagtccattcaacttcacactttggtagaggcaatgtg atgccagcagtgggtgtgggtgcaatgagtcaagactgcatgaagttaattcgctccatg ttgaaagaaggggggcggacaggaacggatccggagtctgcacattttctggacctaatt aaccgccacctgcgctttttctcttctaaagggtggaatctatccaaatctgaatatgat aatcttaagaaatgcttactcaggcttgtaaaagtaataacggaaagacccaaagtttca aatgatgttttaccatgtgctccaccaacaccgccatcagatccctctgaaaatgtcatt tcctacccaaattccacagtgactttgcctctgcagcaggtacaaaccaaagatgcagag gttggtccatgtggtccggtaggtaattctattaaggaagagccactatggaatcatgag gaatgtcaaagtttctgtgatggacatgaggaaataattaaggtaaaaaaagaaccttac aacccaatgccaatttcagaatctagacctatggaggggcttcgtatcgtagctccaggg aaagtacaagaaattaaatctatgttggcacataagaatttttccacaaaacaaaccatt gtaaagggaagattaaaaactgaggatgaacagggtaattgtagtggcttgaaagagatt ggacatgcctcaagtgtaagcccacagccttcaacctcacaatctaagatccctgactct gccaggcttagcaaatcctcaaaagataaatcggatgatgatgagccccttgatgtccga aggcgtcgcctaaaaagatctaaaaagtctagtgaagaggattccgatgatgtcagacag atttcagtacagttgtctagcactgcaaaacagattcatccgagtagcataaacattatt tcagatcacagggtttcttcaagtgacaacaagttattagaaaaccgggtaacgcgtgac acccttgtggatctcgactccaaaagcccaggacgtgattttgacgatttaagtgaatca caagtatttgagtttgaaacacaagcgcacatggtatcttcctggaatgagccacacatt gacatcacagatgtgtccaaaaagcacaaacttcagtatgactccaaagcatatagtagt catgatgctgtggagcccatggatactcagcccatctcagatgaagacattgagaaagcc tgtctccaagtggaggtacaaatctgtaaagagcaacggccacaggaaccgatttcatca ggcacgcgagtgccacccaaacctagttccaatgaaaaaagagattttattcaacattcc aaaagtcagactgaaaaaagtatcccgactgataaaggcaaacgatggccgtgcaaaaag cctcctgttattgcagccctgagtcaaaaaattaagaagcgttcacatgacaccatatct aaggatcttgttaaaccatgttcttccacaatgctgacttcatcctctgttactattgcc ccttccagaggtacctctgcatcctctgttgcacctttacgatccacccctgcagtagtt ccaacaaaaaaggttcgcaaacgtgttgaaccagaacttccagaagagctcctggggtta aaaaagaaggaaagaaaagcttttgacttttcacagcgttccttggtcacgctgggtgaa cttcgttcgcatggccagaatgtgcatgtcgacgcacaaccgaagtcaaaaagaattcgt aaacagaaggttgttgtgaagaaaggaaagaagttacttgcatcacaagatttgcagtac tttagacagagccgtagtatgctcgagaaggcaacatcagccgctcctgttgctgccaaa tcataccagcgtcctgtaccagagaccctgcccaaattaaaacctgcaactgaaactatg gaggaaccaagagatgaggaggacgattactatttccttccctgctctcagcctgatcct gaaagaaggatggacaataaattgggtaccactgaagtcaatactagtaatgcaaatgac tccaaaaatacagttagggattgggatgagaacaataaaagtaaagagttcagttccctt caaaacaataagtgtggttccatggcagaaggcaaagaatccagggatgaaaacggtcat ggtggtgaccattatgatgatgaatggatgtcctttacacaaaatgaaccaacggacatg gagttatgctctcaaatggaacaaatggagtatgccgagaacttgataattacaggatct gtgcacatggacaacgacgctggcaaacattcaaatatttcagaagcagaaccaagtgcg tcacttaaaccagcatcttgcaacactattcagaagtcacttcctgatgcttcaagtgca accacttcaaatgatccgttgctcataaaacctagcacgctcactgagtgtcagaaaaaa gcaaagcctccaaccaagatttatacgtcatgttcccgcagtgcctctttggccaaagaa atgggaaaagtagccaaccctctacctgctgctaatgttactaaggcaaaggttgtacgg gcgccgccaccagccatgccgccgccaccagccatgccgccgccaccagccatgccgccg ccaccagccatgccgccgccaccagccatgccgccgccagcaattccaaaatccacacca cagcatgaatttagccaaccaattccacccagacccatcctgcacactacaaatcaggtt tcaaaaccgtcttttaatgtaacatttgctccccatgttccttcctataagacttactcc agaccagaaatgcctgtaccagtacgaacaccaacgattgatcaaagtcgaaaatttgat aattctccaatgtatgaccagtcgtacctaaaacaggctattttgaagtgggagtacctc atgttcgagaactataaagcctttgggacgccccaagacttgtgtccattagccctaaag gaagtaccaacaacgttctctagctatacggaatactttaatgccttctacccacttctg ctcattaatacatttgaagagatggtcagcgaatggctgaatggtcggaaaattgaaatt tccctgaaggtccagggaattgaatacagaaatcgcattgccactgccagttttacagca agccttaatgctgagcaggaagcgaagcagttgtatcctaaagatgacgatcttgtgctc ctttggctgccagagaacactggagcatatgctaacgatgagccagattttcctgagatt agtgtccactttggatgtgtgttgcgatccagcgtgttaagtaatggaggaggtcatctc tctacgttaaaccttaccattcagacacgtggaaatgtggcctctattaacacccaagat gttcgctgtgaacggattggttccctgatcagcactttgcgtgaattcagagcactgtgt ttgcttcaaaaaagcaaaatggcacatccgattctcaagccagacataaagttttacacg ccctgcgatgggctgccgatcctagatatgcctgaatataatgctgagcagaccaaagca atcagctgtggtgttgcaatggtgaaaaggaagcagaatactccaaagattttgttaata catgggccacctggaactggcaagagcaaaatcatagttggcatgctgcacagacttctc tctgatgccgagagtccttcagtgactaggtatgctaagtctcgaagacccagaattctg ctctgcgcgccatctaatgccgccattgacaacctgatgaagaaaatcattattgcattt aaagaaaagtgcttggacatccgtgctccacaagggaactgtggtgacatcaacttggtg cgactagggagcgagaggaccatttctaaagagctcaaactcttcagccttgactgccag gtcaagaaaggtttggagaaagcgcaacaaaaacatgatttcgatatccagaggatgaag gaggaactggacaagaagttggaaacactgtctcagcagtgtgccaagaccgacaaaaaa tcagctaggtttgaacagctgaatgaaagaaagctattttacttgcgtgaaagggagaag ctgagtcaaaagttaaaggagcttcgtaataaaaaacaagccgtgcagtcgcgtatttta attgacgctcatgtgatctgctgcacgctgagcacaagtggtggtggtctcctcgaatcc gctttccgccgtctcggacacgagccattctgctgtgttattgttgacgaggcaggacag gctaaagaaacagaaacattgattcctttgctttatcgatgtcaaaaccttatcctagtg ggtgaccccatgcagctcccaccaactgttgtttcccagagagccaaagagctgggctat gaccagtcactgatggctcgggtttggaagagcctgtattaccagaacactcagctgtcc cccagcatcttcctccgtgttcagtaccgcatgcaccccaacatttgcgagtttccttcc aagtacatctacgaccacaatttaaaaagtgaccctgaaaccgctcagaagctgtgctca tcctcctggccgtttgaagcctacagagtgtttgatgtgactgatggaaaagagagcaag gagagagattcgtttagtaattgcaaagaggtcaagctggttgtgctgctttataagctg cttggggaaaatcacgccaagcgcaaggaaaaacagccgatgcgtgtcggcatcatcaca ccatataacgcccagaaacaacgcatccagcaggcccttgagaaggatacagacaaggaa ttaaaaaaatacatacatgtggaagtggacactgtggatgggttccagggccgggaaaca gactgcatcattgtgtcttgtgtaagagccagcaatgaaaacggttctattgggtttgtc gcaaatcgccagaggatgaatgtgaccataactagagccaaatccagtttgtttattctg ggacatctccgtacactccaggagcacagcgactggggtgcgctggtacaggatgcagtg aaacgtggcgccacgatcacagtgaccgagtccacctctcacaagtttgtgcagaaggtg ctgaaaccgattcacccccctcgtagatactcgcaccctcccagcctcatgtccaatcct gcatattctgatggacaaagagaccatagaacacatgctagaccttcagacccacgtcta caattgccttttcctgccagcagtgagcatgacggtgggaaccaaagcttctcacgacca aggccacacagtcgccgtgcttcagatgcatgtctagaccaaagctccggacgctccttc catatgaccttagaacgacatcaagaacctcacttttcttcttctagggcacctaggaaa taa

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