Tachysurus fulvidraco (yellow catfish): 125138346
Help
Entry
125138346 CDS
T08119
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
125138346
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125138346
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125138346
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
125138346
NCBI-ProteinID:
XP_047671806
LinkDB
All DBs
Position
7:complement(29774664..29787116)
Genome browser
AA seq
464 aa
AA seq
DB search
MLELASAPPSTPSPPIRPWELPPSRRPHPYPHSHYHTERCHTPARHRRSPPARRQRARRD
RLTRLHHGSPGGPQDENYHHPHHPHTHALHSYGPAVPPHPPTGTDEPRAFHPPALSPRLL
HPQQQGAMVMDLHEQLPQGTVPVSYTVSPVAAHALPPPLCTGQHIPACSSQQQVPACSVV
FSSQQHYPVCPPPMLPACSVQHLPVPYAFPSLLSSDSAFLLHPPHHLSHHHHPPHLAPPT
HFLPFQTQQSRSPLQRIENEVELLGEHLPVGGSFNYAHSGHPSPLPPSTQLQFLSHDPLP
QELFGVPYPHFMPRRIAGRRYRSQQAVAPPPYHPSLLPYFLSVLPVQPTAVGPAISLELD
VDDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFE
SRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVQRDSE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctagaactagcctctgccccgccttccacaccgtcgccacccatcaggccttgggag
ctcccgcccagtcgcagaccgcatccctatcctcactcacactaccatactgagcgctgt
cacacgcccgccagacatagacgcagcccaccagcacggcgtcagcgtgcccggcgtgat
cgcctcactcggcttcatcatggctcacctggagggccccaagacgagaactaccaccac
cctcatcatcctcacacacatgcgcttcactcctatggcccagctgtgccccctcacccc
ccgacaggcaccgacgaaccacgcgccttccaccctcctgctctgtcaccacggttactt
catccgcagcagcaaggcgctatggtcatggaccttcacgaacagcttcctcagggtaca
gtccccgtatcatacacagtgtctccggttgcagcccacgccctcccgcctcctctctgt
acaggacagcatatcccagcatgctcgtctcagcagcaggtgcctgcttgctcagtggtc
ttcagcagccagcagcactaccccgtctgcccacctccgatgctacctgcgtgttcagtg
cagcacttacccgtgccgtacgcgtttccctcactgctttccagtgactctgccttcctg
cttcacccaccacaccacctctcgcaccatcaccacccgccacacctggccccgcccaca
cacttcctgcccttccagacacagcagtcaagatcaccactacagaggattgagaacgag
gtggagctcctcggagaacacctgcctgtaggaggcagctttaactacgcccactcgggc
cacccaagcccccttcctccatctacacagctgcagttcctctctcacgaccccctgcca
caagagctcttcggcgtgccgtatccacacttcatgcctcggcgcatcgcgggccgccgg
taccgttcacagcaagccgtggctccacccccatatcatcccagcctccttccgtacttc
ctatctgttcttccagtgcagcctacagcggtggggcctgcaatcagcttagagctggac
gtagacgacggcgaagttgagaactacgaggctctgctgaacctcgccgagcgtctcggg
gaagccaaaccacgcggcctgacaaaagctgacattgaacagctgccttcctacagattc
aaccccagcaaccatcagtctgagcaaaccctgtgtgtggtatgcatgtgtgatttcgag
tcccgacagttgctccgagtcctgccctgcaatcacgaattccacgccaaatgtgtcgac
aaatggctcaaggctaacagaacttgccctatctgccgagccgacgcctctgaagttcag
agggattctgagtga
DBGET
integrated database retrieval system
