Tachysurus fulvidraco (yellow catfish): 125139447
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Entry
125139447 CDS
T08119
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125139447 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
125139447 (exosc1)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125139447 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
125139447 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
125139447
NCBI-ProteinID:
XP_047659580
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All DBs
Position
18:complement(16713257..16717008)
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AA seq
200 aa
AA seq
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MSPMKLCVPGERLCSVEDCISGAGTYQRHGSIYASLAGYVLRRNEGEELPVISVVKETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEADCVCVTGVQMVPISWCEMQCP
RTHNKEFRKVARVQPEYLQA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctttgcagtgtggaggactgcatc
tctggagcaggcacctatcagcggcacggttccatttacgcctcgctggccggctacgtg
ctcaggaggaacgaaggcgaggagttaccggtgatttctgtagttaaagagactgaagca
cagcttttacctgacgtcggagccatcgtcacctgtaaggtgactagcatcaacccacgg
tttgctaaagtgcacatcctctatgtgggatctactcctcttaaagacaggttcagagga
accatcaggaaagaagatgtgagagcgacagaaaaggacaaagtggagacgtataagagt
ttcaggcccggtgacatcgtcctcgctaaagtgatctcactgggtgacgtgcagtcgaac
taccttctgaccacggcggagaacgagctgggcgtggtcgtggcccacagcgaggcagac
tgtgtgtgtgttacaggagtacagatggttcccatcagctggtgtgagatgcagtgtcct
cgaacacacaataaagagttccgcaaggtggcgcgagtgcagccggagtacctgcaagcg
tga
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integrated database retrieval system
