Tachysurus fulvidraco (yellow catfish): 125141225
Help
Entry
125141225 CDS
T08119
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125141225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
125141225
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125141225
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125141225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
ANCHR-like_BBOX
zf-RING_5
zf-B_box
RING_XB3-XBAT31
zf-RING_6
DUF3450
Baculo_IE-1
zf-RING_4
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
125141225
NCBI-ProteinID:
XP_047669916
LinkDB
All DBs
Position
5:33499217..33510421
Genome browser
AA seq
704 aa
AA seq
DB search
MAEVTDAVALLSLEEDLTCSICLGPFNEPVSLNCGHNFCQMCLQETWSSKSSYFCPHCRT
HYHTKPDLKKNTVLSAVVETFRAKAGSGMGSDEGTDGVFGAAGAMRLSRPEPKPLMCDIC
KKVKAVKTCLTCITSFCSEHVRPHTENPRFRTHELCEPPSDLAERLCPEHGNLMEFFCAR
HKRSICSSCLQQSHKECGFSTPSEQRTKIETDLRDKLNFLDGKTEKNQTAITQMREQQNK
LKDMLAVRKRALEAEYQQIRDMLQRDEREAMDALDKEMESGNTKLNTLIKKFNQNIEQMS
STRDEITNLLARSHSLDFLQASVELPFVVKFEPYCPRIHLDSQRVIAYRSNIVYLKEHIK
EILENGIFLHKPGGGGASGNPPNPREPGPAPREDFGSQPKGGPGGSRRRPQPRDKKENQD
HNERKDPRDHERKDPRDHERKDPRDHERKDPRDHDRKDPRDHERKDHRDHDRKDPKAEKS
GRGPSEGMDFRSMDSPLIMNIRPPVPVPVDTSPPSTISPAIRSELLKYATMLTFDFSTAH
NQVALSENNTKASVSDDPSPYPDIPSRFTTFWQVLCNQSFSHGRHYWEVEMSSNNFCGLG
LAYGSIDRKGPSSRLGRNTQSWCIEWFNIKLSAWHNSSETVLTNPNPSRVGVLLDCDNCT
ATFYNVQDRAYPIHTFVFPFSQPVYPAFSIFSFGSSLTLCKLNN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtgaccgacgccgtggctctgctgagcctcgaggaagatctgacatgcagc
atctgcttgggtcctttcaacgagccggtgagtctgaactgtggccacaacttctgccaa
atgtgtctccaggagacttggagcagtaagagttcttacttctgccctcactgccgcaca
cattaccacaccaagccagacctgaagaagaacacggtgctcagcgcggtggtggaaacc
ttcagggccaaagctggaagtggcatggggtcagacgaagggacagacggcgtcttcggt
gccgccggcgcgatgcgcttatcacgtcccgagcccaaacccctcatgtgtgacatatgc
aaaaaggtcaaggcagtaaaaacatgtctgacttgcatcacgtcgttctgctcagagcac
gtgcgccctcacactgagaaccctcgattccgcacgcacgagctgtgcgagccgccctcc
gacctcgcggaacgcctgtgtccagagcacgggaatctgatggaattcttctgtgcgcgg
cacaagaggagcatctgtagcagctgtttgcagcagagtcataaggagtgcgggttctcc
acccccagcgaacagcgcacgaagatcgagacggatctgagggacaagctgaactttctg
gatgggaaaacggaaaagaaccagacagccataacacagatgagggagcagcaaaacaag
ctcaaggacatgttggcggtgcgtaagcgcgctctggaggccgagtatcagcagatccgg
gacatgctgcagagggacgagcgagaggccatggacgctctggataaagaaatggagagc
ggcaacaccaagctcaacaccctgatcaagaaatttaaccagaacattgagcagatgagc
tccaccagagatgagatcaccaacctgttggccagatctcactctctggacttcttacag
gcatctgtggaattgccctttgtggtgaagtttgaaccttactgccctcggatccacctg
gattctcagcgcgtcatcgcgtaccgatctaacattgtgtacctgaaggagcatattaag
gaaatcctggagaacgggatattccttcacaaaccaggtggcggcggagcttcaggtaat
cctccaaacccgagggaacctggtcctgccccacgtgaagactttggatcacagcccaaa
ggtggtcctggaggatcaaggaggagaccacaaccgagagacaaaaaggagaaccaagat
cacaacgagcgcaaagatcccagagatcacgagcgcaaagatcccagagatcacgagcgc
aaagatcccagagatcacgagcgcaaagatcccagagatcacgaccgcaaagatcccaga
gatcacgagcgaaaagatcacagagatcacgaccgcaaagatcccaaagcagaaaaaagt
ggacgaggtcctagcgaaggaatggatttcaggagcatggacagcccgcttattatgaat
atcagacctcctgttcctgttccagtggatacgagtccaccatcaaccatcagccctgct
ataaggagtgaactgctgaagtatgccaccatgctcacctttgacttcagcacggcacat
aatcaagtggctctctctgagaacaacaccaaggcgtccgtatcagacgatccgtctccg
tacccagacatcccatctcgcttcactacgttttggcaggtgctctgtaatcagagcttt
tctcacggccgtcattactgggaggttgaaatgagcagcaataacttctgcggtttgggt
ctggcgtacggctccatcgatcggaaaggtccttccagccgtctgggccggaacacgcag
tcctggtgtatcgagtggtttaacatcaagctttcggcgtggcacaacagcagcgagacc
gtgctgaccaacccgaacccgagccgcgtgggtgtcctgctcgactgtgataactgcacc
gccaccttctataatgtgcaggaccgcgcctaccccatccacaccttcgtctttcctttc
tcccagcccgtgtacccggccttctcgatcttctccttcggctcatctcttacactttgc
aaactcaataattaa
DBGET
integrated database retrieval system