KEGG   Tachysurus fulvidraco (yellow catfish): 125141225
Entry
125141225         CDS       T08119                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    125141225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tfd04121]
    125141225
Enzymes [BR:tfd01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125141225
Ubiquitin system [BR:tfd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    125141225
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 ANCHR-like_BBOX zf-RING_5 zf-B_box RING_XB3-XBAT31 zf-RING_6 DUF3450 Baculo_IE-1 zf-RING_4 Allexi_40kDa
Other DBs
NCBI-GeneID: 125141225
NCBI-ProteinID: XP_047669916
LinkDB
Position
5:33499217..33510421
AA seq 704 aa
MAEVTDAVALLSLEEDLTCSICLGPFNEPVSLNCGHNFCQMCLQETWSSKSSYFCPHCRT
HYHTKPDLKKNTVLSAVVETFRAKAGSGMGSDEGTDGVFGAAGAMRLSRPEPKPLMCDIC
KKVKAVKTCLTCITSFCSEHVRPHTENPRFRTHELCEPPSDLAERLCPEHGNLMEFFCAR
HKRSICSSCLQQSHKECGFSTPSEQRTKIETDLRDKLNFLDGKTEKNQTAITQMREQQNK
LKDMLAVRKRALEAEYQQIRDMLQRDEREAMDALDKEMESGNTKLNTLIKKFNQNIEQMS
STRDEITNLLARSHSLDFLQASVELPFVVKFEPYCPRIHLDSQRVIAYRSNIVYLKEHIK
EILENGIFLHKPGGGGASGNPPNPREPGPAPREDFGSQPKGGPGGSRRRPQPRDKKENQD
HNERKDPRDHERKDPRDHERKDPRDHERKDPRDHDRKDPRDHERKDHRDHDRKDPKAEKS
GRGPSEGMDFRSMDSPLIMNIRPPVPVPVDTSPPSTISPAIRSELLKYATMLTFDFSTAH
NQVALSENNTKASVSDDPSPYPDIPSRFTTFWQVLCNQSFSHGRHYWEVEMSSNNFCGLG
LAYGSIDRKGPSSRLGRNTQSWCIEWFNIKLSAWHNSSETVLTNPNPSRVGVLLDCDNCT
ATFYNVQDRAYPIHTFVFPFSQPVYPAFSIFSFGSSLTLCKLNN
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggctgaagtgaccgacgccgtggctctgctgagcctcgaggaagatctgacatgcagc
atctgcttgggtcctttcaacgagccggtgagtctgaactgtggccacaacttctgccaa
atgtgtctccaggagacttggagcagtaagagttcttacttctgccctcactgccgcaca
cattaccacaccaagccagacctgaagaagaacacggtgctcagcgcggtggtggaaacc
ttcagggccaaagctggaagtggcatggggtcagacgaagggacagacggcgtcttcggt
gccgccggcgcgatgcgcttatcacgtcccgagcccaaacccctcatgtgtgacatatgc
aaaaaggtcaaggcagtaaaaacatgtctgacttgcatcacgtcgttctgctcagagcac
gtgcgccctcacactgagaaccctcgattccgcacgcacgagctgtgcgagccgccctcc
gacctcgcggaacgcctgtgtccagagcacgggaatctgatggaattcttctgtgcgcgg
cacaagaggagcatctgtagcagctgtttgcagcagagtcataaggagtgcgggttctcc
acccccagcgaacagcgcacgaagatcgagacggatctgagggacaagctgaactttctg
gatgggaaaacggaaaagaaccagacagccataacacagatgagggagcagcaaaacaag
ctcaaggacatgttggcggtgcgtaagcgcgctctggaggccgagtatcagcagatccgg
gacatgctgcagagggacgagcgagaggccatggacgctctggataaagaaatggagagc
ggcaacaccaagctcaacaccctgatcaagaaatttaaccagaacattgagcagatgagc
tccaccagagatgagatcaccaacctgttggccagatctcactctctggacttcttacag
gcatctgtggaattgccctttgtggtgaagtttgaaccttactgccctcggatccacctg
gattctcagcgcgtcatcgcgtaccgatctaacattgtgtacctgaaggagcatattaag
gaaatcctggagaacgggatattccttcacaaaccaggtggcggcggagcttcaggtaat
cctccaaacccgagggaacctggtcctgccccacgtgaagactttggatcacagcccaaa
ggtggtcctggaggatcaaggaggagaccacaaccgagagacaaaaaggagaaccaagat
cacaacgagcgcaaagatcccagagatcacgagcgcaaagatcccagagatcacgagcgc
aaagatcccagagatcacgagcgcaaagatcccagagatcacgaccgcaaagatcccaga
gatcacgagcgaaaagatcacagagatcacgaccgcaaagatcccaaagcagaaaaaagt
ggacgaggtcctagcgaaggaatggatttcaggagcatggacagcccgcttattatgaat
atcagacctcctgttcctgttccagtggatacgagtccaccatcaaccatcagccctgct
ataaggagtgaactgctgaagtatgccaccatgctcacctttgacttcagcacggcacat
aatcaagtggctctctctgagaacaacaccaaggcgtccgtatcagacgatccgtctccg
tacccagacatcccatctcgcttcactacgttttggcaggtgctctgtaatcagagcttt
tctcacggccgtcattactgggaggttgaaatgagcagcaataacttctgcggtttgggt
ctggcgtacggctccatcgatcggaaaggtccttccagccgtctgggccggaacacgcag
tcctggtgtatcgagtggtttaacatcaagctttcggcgtggcacaacagcagcgagacc
gtgctgaccaacccgaacccgagccgcgtgggtgtcctgctcgactgtgataactgcacc
gccaccttctataatgtgcaggaccgcgcctaccccatccacaccttcgtctttcctttc
tcccagcccgtgtacccggccttctcgatcttctccttcggctcatctcttacactttgc
aaactcaataattaa

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