Tachysurus fulvidraco (yellow catfish): 125145309
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Entry
125145309 CDS
T08119
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagosome
tfd04514
Cell adhesion molecules
tfd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125145309
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125145309
09142 Cell motility
04810 Regulation of actin cytoskeleton
125145309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
125145309
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
125145309
04515 Cell adhesion molecules [BR:
tfd04515
]
125145309
04090 CD molecules [BR:
tfd04090
]
125145309
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
125145309
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125145309
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125145309
Cell adhesion molecules [BR:
tfd04515
]
Integrins
Integrin alpha subunits
125145309
CD molecules [BR:
tfd04090
]
Proteins
125145309
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
125145309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
vWA-TerF-like
Copine
Motif
Other DBs
NCBI-GeneID:
125145309
NCBI-ProteinID:
XP_047673063
LinkDB
All DBs
Position
8:complement(23767877..23790629)
Genome browser
AA seq
1132 aa
AA seq
DB search
MDWNLALYMFLISVSQLVLAFNIDPNPWKDFTQPQNIAFGYKVIQRDRDSVIVSDPLLQS
QNQRGKVYMCAVSNGQCSPMQINVPSEAVNMSLGLSMTKDRKSSNVVVCGPTIPKDCKQF
TSYNGMCFKLGSNSPILRTLRDCPTGTDIAFLLDGSSSVIKIDFTIMKNFVINMINEFKD
RDFQFAVAQYSDGCEIHIQFNTSSGTKQIRTIRQMGRGTHTASAINKVVDEVFTTTAGAR
ENANKVLVVITDGQSNDKIPLSVAVQNAERKNIIRYAVGVGNAFKTNAAEQELYTIASDS
DNKHVFKVDDFSVLKEIQKTLEANIIAIEGTQASGVSTRMEFAQDGFTAEFDENSDMIMS
AVGAFQWKGGYQKYSSTSGTPLNSFQKGNGNESYLGYSMVVAQTFRQFYIIQGAPRDKHM
GAVIIYNGDNVFQALYPPEPQIGAYYGAELCVVDLNLDNITDLLLVSAPMYNEKDQEGKV
FIYTFQGSFGSQLQYIGAVKGIPGQRGRFGLTLASPADLNEDSLVDVVVGAPLEENYQGS
IYIFNGRNEDIAPTFSQRITGSSVRNGLQFFGISLSPSALDLSEDQLPDLAVGSKGAVLL
LRSRPIVDLQNTVTFIPSKIPTKDFDCNKTLTNTVKLCFKMTRPNNDKQDLSAKINYTLT
LDAKSQNYRAYFSEKKRILTDTIDVLLQEKCKEHVFSLEACPNDAVNPIINELKYTFEGL
PINQQDHLRPILRPNTKNTSDYNLDFEINCGPDNICIDNLKVDFNFSGYSVIQIGTMQEL
NVTVSIVNRGENSYNSRVILKYPFGLSFRRSGTKEGRVECESVDSDEKATLGETTCLISK
PIFKTNGLAIFDVTYGINRESNFDRMMKFTASASSDNDEHSPNNELFREKTIDVKYAIYV
SMIRHENSTIHINFTEGENNLERPVHQIFKVENFLRDLSFNIFIRVPIKLGVKDIWTNNN
LEIQGCSADKDEQPTIQDFVAALKNQPEVNCSVAVCRVFKCAASLIKNQAIYYSISGNVS
SGWLEQIGLKSAIFELFSTATLDYNETTYIYSPSGSINTAPIGKVNTQVELKGEKLPLKE
VIGFGVGEIVLLAVITAVLYKTGFFKSKYKTMLEEARASARDRGTGDGLVAE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggactggaatcttgcattgtacatgttcctgatttctgtatctcagttagtgttggct
ttcaacattgatccaaatccatggaaagattttacccaaccacaaaacatagccttcggc
tacaaagtgatacagagagatcgtgacagtgtgattgtgagtgatccattactccaaagt
cagaatcaaagagggaaagtctacatgtgtgctgttagtaacggtcaatgttcaccaatg
caaattaatgttccctctgaggctgtcaacatgtcacttgggctgtcaatgactaaagat
cgcaagtcttcaaacgtagtggtctgtggcccaaccattcccaaggactgtaagcagttt
acttcatacaatggcatgtgttttaaactgggttccaatagtcctatactacgcactttg
agagattgtccaacaggaacagacattgctttcttgctggatggctctagtagtgttata
aagatagattttactataatgaagaattttgttataaacatgattaacgagttcaaagac
agagattttcagtttgcagttgcacaatattctgatggttgtgaaatacacatacaattc
aacacgtcttcaggcactaaacaaatacgtacaatcagacaaatgggtcgtgggacccac
acagcctctgctatcaacaaagtcgtggatgaagtatttaccactacggcaggggccaga
gaaaatgctaacaaagtgttggtggtcatcactgacggccaatcaaatgacaaaattcca
ctgtcagttgctgttcagaatgcagagaggaagaacattattcgctatgctgtaggggtc
ggcaatgcctttaaaactaatgcagcagaacaagagttgtatactattgcgtcagattca
gacaataaacatgtatttaaagtggatgacttttctgtattgaaggaaattcaaaaaaca
ctggaagcgaatatcattgcaattgagggaacccaggcttcaggagtctccaccaggatg
gaatttgcacaggatggcttcactgcagaatttgatgaaaatagtgacatgataatgagt
gcagttggagcatttcagtggaaaggtggctatcagaagtacagcagtacaagtggaaca
ccactaaactcctttcagaagggcaacggtaatgaaagttatctaggttattccatggtg
gtagcacaaacctttaggcaattctacatcattcagggagctccaagagataagcacatg
ggggcagtgatcatatacaatggagacaatgtctttcaggcactgtatcctcccgagcct
caaattggtgcctattatggtgctgagttatgtgttgtggacttgaatttggacaacatc
acagacctcctacttgtttctgctccgatgtataatgagaaggatcaggaaggaaaagtc
ttcatctacacctttcaaggatcttttgggtcccagctacaatacataggggcagtgaaa
ggaattcctggacaaagggggaggtttggcctgacgctggcgagccctgcagatctaaat
gaagacagcctggtggatgtagtggtaggagcacctctagaagagaattaccagggcagc
atctacatctttaatgggagaaatgaagacattgccccaaccttctctcagagaatcaca
ggctcgtctgtgcgcaatggactgcaattttttggtatttctctgagtccatctgctctc
gaccttagtgaagaccaactgccagatcttgctgtcggttccaaaggagctgtcttgctt
ttaagatccagacccattgtggatttgcagaacacagtaactttcatcccatccaaaatt
cccaccaaagactttgactgcaacaaaactttaacaaacacagtaaaattgtgtttcaaa
atgacgaggccgaataatgacaaacaagatttgtctgcaaagataaactatacattaaca
cttgatgccaaatcacagaactaccgggcctacttttcagaaaaaaaacgtattctaact
gacaccatagatgtgttgctacaagagaaatgcaaggaacatgtattcagtctagaggcc
tgccctaatgatgcagtaaacccaataattaatgagttaaagtatacatttgagggtctt
cctattaatcaacaggatcatttgcggccgatactgcgacctaatacaaagaatacctca
gattataacctggattttgaaataaactgtggacctgataacatctgcattgataatctc
aaagtggattttaatttttctggatactcagtcatacaaattggaacaatgcaagaactg
aatgtaactgtttccatagtgaacagaggggaaaattcctacaacagtagagtaattctt
aagtacccttttggactgtctttcaggagatccggcactaaagagggtagagtggagtgt
gaatctgtggatagtgatgaaaaagctacactgggggagacgacttgtctcatcagtaaa
ccaattttcaagactaatggtttggctatctttgatgttacatatggcataaacagagaa
agtaactttgacaggatgatgaaattcactgcatctgcttccagtgacaatgacgaacat
tcacctaacaatgaactcttcagagaaaaaaccattgatgttaaatatgccatctacgtt
tcgatgatcaggcatgaaaattccactattcacatcaactttactgaaggagaaaataac
cttgagagaccagtccaccaaatattcaaggtggaaaatttcctcagggatttgagcttc
aacattttcatcagagtacccataaaattaggagttaaggacatctggactaataacaac
ttggagattcaaggctgcagtgcagacaaagatgagcaacccacaatccaagattttgta
gcagcactgaaaaatcagccagaggtgaattgctctgtagctgtgtgcagagtgtttaaa
tgtgctgcaagtctcattaaaaatcaagcaatatactacagcatctctggtaatgtcagc
tctggatggcttgaacagattggactgaaatcagccatttttgagctgttcagtacagca
accctggactacaacgaaacaacatatatctactccccctctggttctataaacactgca
cctattggcaaggttaatacccaggtggagctgaaaggggagaaattgccacttaaggag
gtaattggctttggtgtaggagaaattgtgcttttagctgttatcactgctgttctctat
aagactgggttcttcaaaagcaaatataagacgatgttggaggaagcaagagcatcagcc
agagacagaggaactggagacggcctcgtggcagagtga
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integrated database retrieval system
