Tachysurus fulvidraco (yellow catfish): 125145310
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Entry
125145310 CDS
T08119
Name
(RefSeq) integrin alpha-M-like isoform X1
KO
K06461
integrin alpha M
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagosome
tfd04514
Cell adhesion molecules
tfd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125145310
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125145310
09142 Cell motility
04810 Regulation of actin cytoskeleton
125145310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
125145310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
125145310
04515 Cell adhesion molecules [BR:
tfd04515
]
125145310
04090 CD molecules [BR:
tfd04090
]
125145310
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
125145310
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125145310
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125145310
Cell adhesion molecules [BR:
tfd04515
]
Integrins
Integrin alpha subunits
125145310
CD molecules [BR:
tfd04090
]
Proteins
125145310
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
125145310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Copine
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
125145310
NCBI-ProteinID:
XP_047673064
LinkDB
All DBs
Position
8:23939774..24055634
Genome browser
AA seq
1132 aa
AA seq
DB search
MDWNLALYMFLISVSQSVLAFNIDPNPWKDFTQPQNIAFGYKVIQRDRDSVIVSDPLLQS
QNQRGKVYMCAVSNGQCSPMQINVPPEVVNMSLGLSMTKDRKSSNVVVCGPTIPKDCKQF
TSYNGMCFKLGSNSPIPRTLRDCPTRTDIAFLLDGSGSVSQSDFTIMKNFVISMINEFKD
RDFQFAVAQYSLNSVIHVQFNTFSSTEQIHKIRQVRGGAYTASAINKVVNEVFTTRAGAR
ENVNRVLVVITDGQSNDTNLLPDAVRNAERKNIIRYAVGVGNAFQTNAAEQELNTIASDP
DNKHVFKVNDFSVLKEIQKTLEANIIAIEGTQASGDSTRMEFAQDGFTADFDENSDMIMS
AVGAFQWKGGYQKYSSTRGTPLNSFQKGNGNESYLGYSMAVAQTFKQFYIIQGAPRDKHM
GAVIIYNGDNVFQALDPPEPQIGAYYGAELCVVDLNLDNITDLLLVSAPMYNEKDQEGKV
FIYTFPGYFGSQLQYIGAVKGISGQRGRFGLTLASPADLNEDSLVDVVVGAPLEENYQGS
IYIFNGRNEDIAPTFSQRITGSSVRNGLQFFGISLSPSALDLSKDQLPDLAVGSKGAVLL
LRSRPIVDLQNTVTFIPSKIPTKDFDCNKTLTNTVKLCFKMTRRNNDKQDLSAKINYTLT
LDAKRPSYRAYFSEIKRILTDTIDVLLQEKCKEHVFSLEACPNDALNPVINELKYTFEGL
PLNQQDNLRPILRPNTKTTSDYNLDFEINCGTDNICIDNLKVDFNFSGYSVIQVGIMQEL
NVTVSIVNRGENSYNSRVILKYPFGLSFRRSGTKEGRVECESVDSDGKATLGTTTCLISK
PIFKTNGLAIFDVTYGINRESNFDRMMKFTASASSDNDKHSPNNELFREKNIDVKYAIYV
SMTRHENSTIHINFTAGQNNLERPVHQIFKVENFLRDLSFNIFIRVPIKLGVKDIWTNNY
LEIQGCSADKDEQPTVQDFVAALKKQPEVNCSVAVCRVFKCAANLIKNQAIYYSISGHVS
SGLLEQIGLISAIFELISTATLDYNETTYIYSPSGSINTAPIGKINTQVELYGEKFPLKE
VIGGGVGGIVLLAVITAALYKTGFFKSKYKTMLEEARAAARDGGTGDSLVAE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggactggaatcttgcattgtacatgttcctgatttctgtatctcagtcagtgttggct
ttcaacattgatccaaatccatggaaagattttacccaaccccaaaacatagccttcggg
tacaaggtgatacagagagatcgtgacagtgtgattgtgagtgatccattactccaaagt
cagaatcaaagagggaaagtctacatgtgtgctgttagtaacggacaatgttcaccaatg
caaattaatgttccccctgaggttgtcaacatgtcacttgggctgtcaatgactaaagat
cgcaagtcttcaaacgtagtggtctgtggcccaaccattcccaaggactgtaagcagttt
acttcatacaatggcatgtgttttaaactgggttccaatagtcctataccacgcactttg
agagattgtccaacaagaacagacattgctttcttgctggatggctctggaagtgttagc
cagagtgattttactataatgaagaactttgttataagcatgattaacgagttcaaagac
agagattttcagtttgcagttgcacaatattctttaaacagtgtaatacatgtacaattc
aacacattttcaagcactgagcaaatacataaaatcagacaagtgcgtggtggggcctac
acagcatctgctatcaacaaagttgtgaatgaagtatttaccactagggcaggggccaga
gaaaatgttaacagagtgttggtggtcatcactgacggccaatcaaatgacacaaatcta
ctgccagatgctgttcggaatgcagagaggaagaacattattcgctatgctgtaggggtc
ggcaatgcctttcaaactaatgcagcagaacaagagttgaatactattgcgtcggatcca
gacaataaacatgtatttaaagtgaatgacttttctgtattgaaggaaattcaaaaaaca
ctggaagcaaatatcattgcaattgagggaacccaggcttcaggagactccaccaggatg
gaatttgcacaggatggcttcactgcagactttgatgaaaatagtgacatgataatgagt
gcagttggagcatttcagtggaaaggtggttatcagaagtacagcagtacaagaggaaca
ccactaaactcctttcagaagggcaacggtaatgaaagttatctaggttattccatggcg
gtagcacaaacctttaagcaattctacatcattcagggagctccaagagataagcacatg
ggcgcagtgatcatatacaatggagacaatgtctttcaggcactggatcctcccgagcct
caaattggtgcctattatggtgctgagttatgtgttgtggacttgaatttggacaacatc
acagacctcctacttgtttctgctccgatgtataatgagaaggatcaggaaggaaaagtc
ttcatctacacctttccaggatattttgggtcccagctacaatacataggggcagtgaaa
ggaatctcaggacaaagggggaggtttggcctgacgctggcgagccctgcagatctaaat
gaagacagcctggtggatgtagtggtaggagcacctctagaagagaattaccagggcagc
atctacatctttaatgggagaaatgaagacattgccccaaccttctctcagaggataaca
ggctcgtctgtgcgcaatggactgcaattttttggtatttctctgagtccatctgctctg
gaccttagtaaagaccaactgccagatcttgctgtcggttccaaaggagctgtcttgctt
ttaagatccagacccattgtggatttgcagaacacagtaactttcatcccgtccaaaatt
cccaccaaagactttgactgcaacaaaactttaacaaacacagtaaaattgtgtttcaaa
atgacgaggcggaataatgacaaacaagatttgtctgcaaagataaactatacattaaca
cttgatgccaaacgaccgagctaccgggcctacttttcagaaataaaacgtattctaact
gacaccatagatgtgttgctgcaagagaaatgcaaggaacatgtattcagtctagaggcc
tgccctaatgatgcactaaacccagtaattaatgagttaaagtatacatttgagggtctt
cctcttaatcaacaggataatttgcgaccgatactgcgacctaatacaaagactacctca
gattataacctggattttgaaataaactgtggaactgataacatctgcattgataatctc
aaagtggattttaatttttctggatactcagtcatacaagttggaataatgcaagaactg
aatgtaactgtttccatagtgaacagaggggaaaattcctacaacagtcgagtaattctt
aagtacccttttggactgtctttcaggagatccggcactaaagagggtagagtggagtgt
gaatctgtggatagtgatggaaaagctacactggggacgacgacttgtctcatcagtaaa
ccgattttcaagacaaatggtttggctatctttgatgttacatatggcataaacagagaa
agtaactttgacagaatgatgaaattcactgcatctgcttccagtgacaatgacaaacat
tcacctaacaatgaactcttcagagaaaaaaacattgatgttaaatatgccatctacgtt
tcgatgaccaggcatgaaaattccactattcacatcaactttactgcaggacaaaataat
cttgagagaccagtccaccaaatattcaaggtggaaaatttcctcagggatttgagcttc
aacattttcatcagagtacccataaaattaggagttaaggacatctggactaataactac
ttggagattcaaggctgcagtgcagacaaagatgagcaacccacagtccaagattttgta
gcagcactgaaaaaacagccagaggtgaattgctctgtagctgtgtgcagagtgtttaaa
tgtgcagcaaatctcattaaaaatcaagcaatatactacagcatctctggtcacgtcagc
tctggattgcttgaacagatcggattgatatcagccatttttgagctgatcagtacagca
accctggactacaacgaaacaacatatatctactccccctctggttctataaacactgca
cctattggcaagattaatacccaagtggagctgtatggggagaaattcccacttaaggag
gtaattggtggtggtgtaggaggaattgtgcttttagctgttatcactgctgctctctat
aagactgggttcttcaaaagcaaatataagacgatgttggaggaagcaagagcagcagcc
agagacggaggaactggagacagcctcgtggcagagtga
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integrated database retrieval system