Tachysurus fulvidraco (yellow catfish): 125145335
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Entry
125145335 CDS
T08119
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03020
RNA polymerase
tfd04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125145335
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125145335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
125145335
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125145335
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125145335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-GeneID:
125145335
NCBI-ProteinID:
XP_047673402
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All DBs
Position
8:758977..778728
Genome browser
AA seq
870 aa
AA seq
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MHLLPLNYYIMLCATHCATHCATHCATQLCHTLRHTLRHSTAPHTAPLTCGHSLRHTLRH
TLRTHCATHCATHCATHCATHCATPAPPTLHYALLYTLHYTLHYTLHYSLELLLCGSMDK
GTLGSGSKNNIFYILLRDWGQMEAADAMSRLARVAPTYLSNRGFSIGIGDVTPGQGLLKA
KQELLDAGYKKCDEYLRPXITGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELD
KSNSPLIMALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKG
FVADSFYSGLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCTQYDLTVRS
STGDIIQFIYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCADEPALSKNELVLTAESI
MKRKDFTCCRDTFLQTMTGTGSQKFMEEIKKFINSVSEKIKKTRDKYGINDNGSTEPKVL
YQLDRITPTQLGKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVAS
MNITLGVPRIKEIINASKNISTPIITAHLDTEDDADFARLVKGRIEKTLLGEISEYIEEV
FLPDDTFILVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPREN
SKSSMYYVLQSLKQELPKVVVQGIPEVSRAVIHIDEQSGHQKFKLLVEGDNLRAVMATHG
VNGNRTTSNNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEI
LGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLF
KLLHRADRDPNPLQRSLLFDMADFHIPLAS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgctgccactgaactactacattatgctctgcgccacacactgcgccactcac
tgcgccacacactgcgccacacaactgtgccacacactgcgccacacactgcgccacagc
actgcgccacacactgcgccactcacctgcggccactcactgcgccacacactgcgccac
acactgcgcactcactgcgccactcactgcgccacacactgcgccacacactgcgccaca
cactgcgccacacctgcaccacccacactgcactacgctctgctctacacactacactac
acactgcactatactctacactattctcttgagttactactatgtggcagtatggataaa
ggaacactgggttcaggatcaaagaacaatatcttctacatcctgctgagagactggggt
cagatggaggcagctgacgccatgagtcgccttgcccgagtcgcacctacatacctctct
aaccgtgggttctccattgggatcggggacgtgacccctggtcagggtctgctgaaggcc
aaacaggaactgctggatgctggatataagaaatgtgacgagtacttgaggccctgaata
acaggaaaactccaacaacagccaggttgtacagctgaggagactctggaggcgctgatc
cttaaggagttgtcagtaattagagatcacgctggcagtgcatgtctgagagagttggac
aagagtaacagtcctctcatcatggctctgtgtggctcaaaggggtcgtttattaacatc
tctcagatgatagcgtgtgtgggtcagcaggccatcagtggctctcgagttcctgatggc
tttgagaatcgatctctgccgcactttgagaaacactcaaaacttcctgcagctaaaggc
tttgtggcagacagtttttactcaggtttgacccccactgagttttttttccacactatg
gctggccgtgagggtctggtggacacggcagtgaaaacagcagagaccggatacatgcag
aggcgtttggtgaagtctctggaggatctgtgtactcagtatgacctcactgtgcgcagc
tccactggtgacatcatccagttcatctacggaggagacggactcgaccccgccgccatg
gagggcaaagacgaaccactcgagttcaagagagtgctggataacatccgggctgtctac
acctgtgctgatgaacctgctctgagtaaaaatgagctcgtgctgactgctgaatccatc
atgaagaggaaggacttcacctgctgcagagacacattcttacagacaatgactggtact
ggaagccagaagtttatggaggaaattaaaaaatttatcaacagcgtgtctgagaaaatc
aagaaaaccagagacaagtacggcataaatgataacggatccacagagcctaaagtttta
taccagctggacagaatcactcccacacaactggggaaatttctggaaacctgcagggac
aagtacatgagagctcagatggagcccgggtcagccgtgggtgctctgtgtgctcagagt
atcggagaacctggcactcagatgaccctgaagaccttccactttgcaggtgtggcgtcg
atgaacatcactctgggggtcccacgtatcaaagaaatcatcaacgcctcaaagaacatc
agcacccccatcatcaccgctcacctggacacagaggacgacgcagacttcgctcgactg
gtgaagggcaggattgagaaaacactccttggagagatatcagagtacatagaggaggtg
tttctgcccgatgacactttcatcctggttaaactttcacttgagaggatccgcctgctc
agactggaggtgaacgcagagacagtgaggtactctatctgtatgagtaagctgagagtg
aagcctggtgacattgcggttcatggtgaggcggtggtgtgtgtgtctcctcgggagaac
agcaagagctccatgtactatgtcctgcagtcactcaaacaggagctacccaaggttgtt
gtacagggcattcctgaggtttcccgtgctgtgatccacatcgatgagcaaagcggtcat
cagaagttcaagttgttggtggaaggagataacctgcgtgctgtcatggcaacacacggt
gtcaacggcaaccgcaccacttccaacaacacctatgaggtggagaagacgttgggtatc
gaggctgcgaggacgaccatcattaacgagatccagtacaccatggtgaatcacggcatg
agcatcgaccggcgtcatgtcatgctgctcgctgatctcatgtcctacaagggggagatc
ctgggcatcactcgctttggcctggctaagatgaaggagagcgtcctgatgctggcctcg
tttgagaagaccgctgatcatctgttcgacgctgcgtatttcggacagaaagattctgtg
tgtggtgtatctgagtgtataattatgggaatccccatgaacattggcactggtctgttt
aaactcttacacagagccgatagagaccccaatcctctacagagatccttgctgtttgac
atggctgacttccacataccactcgcctcctaa
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