Tachysurus fulvidraco (yellow catfish): 125146241
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Entry
125146241 CDS
T08119
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125146241 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
125146241 (dhx36)
03012 Translation factors [BR:
tfd03012
]
125146241 (dhx36)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125146241 (dhx36)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125146241 (dhx36)
Translation factors [BR:
tfd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125146241 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NB-ARC
TsaE
AAA_16
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
125146241
NCBI-ProteinID:
XP_047678729
LinkDB
All DBs
Position
13:complement(24577627..24629659)
Genome browser
AA seq
1008 aa
AA seq
DB search
MSCGYGRGRGRRGGRGGGGGRGGGERWSSDWEARDEQPRGGGGRGKHPPHLKGREIGLWY
AKWGGVKRAEAERKARAVVQMDESREQHITQLLNSVQREPSRDYGPSVPPHRQVKPEPSG
HSYFDGDGPSEEPQKTVKVAKIEAVKEEDVEIKPEIKQEHVDRDLEYLVQEIGRKPSLDE
ELKSDLQDKRQNSKYLEMLTFREKLPSYSMREELVKLIQANLVVVVSGETGCGKTTQVTQ
FILDHYIQRGMGSLCRVVCTQPRRISAISVAERVAAERAESVGEGKSCGYQIRLQSRLPR
KQGSVLYCTTGIILQWLRSDPCLSSISHLVLDEIHERSLHSDVLLTIVKDLLRYRDDLRV
VLMSATLNADKFSKYFDHCPMIHIPGHTFPVKEYLLEDVVEMLRFRPQQQDRRPRFRRGF
MNGQNVRPEKQEKESEYKESWPCFARTLRDRFSDSTIDTLEMMDEDDKINLELIVALIRH
IVLNEDDGAILVFLPGWDNISSLNDLLLADQMFKSDQFVIIPLHSLMPTVNQTQVFKRPP
PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRKG
RAGRVSPGKCYHLYNSLRASLLDGYQLPEIQRTPLEELCLQIKILKLGPIASFLRKTLDP
PSDRAIELAITHLMDLNALDRNEELTPLGFHLARLPVEPHIGKMILFGALLACLDPVLTI
AASLSFKDPFSIPLGKEKLADQRRKVLSKNTKSDHLTVVNAFRGWEEAKRRGYRCEREYC
WDNFLSANTLQMIQNMKGQFAEHLLAAGFVSSKDPKHSGANINSENEKLLKAVIVAGLYP
KVAKIRPSHHKKRPIPAKVYTKADGKVCIHPKSVNSEESQFHYTWLIYHLKMRTTSIFLY
DCTEVSPFSLLFFGGDISIQKDQEQETIAVDEWIVFQSPARIANLVKNLKKELDLLLEEK
IKRPRPVDWSDRTSKDCAVISAIIDLITTQESAVSSHEPYRKSRQSWD
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtggctacgggagaggaagaggaaggagaggaggaagaggaggaggaggagga
agaggaggaggagaacggtggagctccgactgggaagcccgggatgagcagcctcgaggc
ggcggaggtcgggggaaacacccgccgcacctgaagggcagagagatcggactgtggtac
gccaagtgggggggagtgaagcgtgcagaggccgagaggaaggcgagagccgtagtgcag
atggacgagtcgagagagcagcacatcacacaactgctgaattcggtccagagagaaccg
tctcgtgactacgggccgtccgtccctccgcaccggcaggtgaagccggaaccgagcggc
cacagctacttcgatggtgacggcccttcagaagagccgcagaaaacggtgaaagtggct
aaaatcgaggcggtgaaggaagaggacgtggagataaagcctgagataaagcaggagcac
gtcgatcgagatctggagtacctggtgcaggagatcggtcgaaagccttcgctggatgaa
gagctgaaaagtgaccttcaggacaaaagacagaactcaaaatatctggaaatgctgacg
tttcgagagaagctgccttcctacagcatgagagaggagttggtgaagctgattcaggcc
aatctggtggtggtggtgagcggagaaaccggttgtggcaaaaccacgcaggtgactcag
ttcatcctggaccactacatccagcgtggcatgggctcgctctgcagggtggtgtgcaca
cagccgcgacgcatcagcgccatctcggttgccgagagggtggcggcagagagggcggag
tctgtgggagaggggaagtcctgtggatatcagatccgtctgcagagccggttgccacgg
aaacaaggctcggtgctgtattgtacgacgggaattattcttcagtggctgcgctcggat
ccgtgtttatccagcatcagtcatctggttctagatgagatccacgagcgcagtctgcac
tcagacgtcctcctcaccatcgtgaaggatctcctgaggtacagagacgacctcagggtc
gtgctcatgagcgccacgctcaacgccgacaagttcagcaagtacttcgatcactgcccc
atgatccacatcccgggtcacacctttcctgtgaaggagtacctgctggaggacgtggtg
gagatgctcaggttccggccgcagcagcaggatcgacgtccacgcttcaggagaggattc
atgaacggacagaacgtacggcccgagaagcaggagaaggaatcggagtacaaggagagc
tggccgtgtttcgctcgcacgctcagagacaggttttctgacagtaccatcgacaccctg
gagatgatggacgaggacgacaagatcaacctggagctgatcgtagcgctcatccgccac
atagtgctgaacgaagacgatggagccatcttggtgttcctgcctggctgggacaacatc
agcagcctgaatgacctgctcctggctgaccagatgtttaaatctgatcagtttgtgatc
attccactgcactccctgatgcccacagttaaccagacacaggtttttaaaaggccacct
cctggcgtccggaaaatcgtgattgcaactaacatagcagaaaccagtatcactatagat
gacgtggtgtatgtgatcgatggagggaaaattaaggaaactcacttcgacacacagaac
aacatcagtacaatgacggcagagtgggtgagtctcgccaacgccaagcagaggaagggg
cgcgctggcagagtgtctccaggtaaatgctaccacctgtataacagcctgagggcgagt
ctgctggacggctaccagctccctgagatccagcgcacaccgctcgaggagctttgcctg
cagattaagatcctgaaattgggtccaatcgcatcattcctcagaaagactctggacccg
ccatcagacagagccatcgagctggctatcactcacttaatggatctgaatgcattggac
cgtaacgaggagttgactccactgggctttcacctggcccgtttacctgtggagccacac
atcggaaagatgattctgtttggagcgctgctcgcctgcctggaccctgtgctaaccata
gcagctagccttagctttaaagacccgttctccataccactggggaaggaaaaactagct
gaccagagaagaaaagtcctgtccaaaaacaccaagagtgaccacctgactgtagtcaac
gccttccggggctgggaggaagccaagcggcgtggttacaggtgcgagcgggaatactgc
tgggacaacttcctgtctgccaacacgctacagatgatacagaacatgaaaggccagttc
gcagagcatctcttggccgctggatttgtgagcagtaaagacccgaaacattctggggcc
aacatcaactcggaaaacgagaagctgttgaaggctgtgattgtggctggtttgtacccc
aaagtggccaagattcgcccgagccaccacaagaagagacccataccagcaaaggtgtac
accaaagctgatgggaaggtctgtatacatcctaaatctgtcaacagcgaggagtcgcag
ttccactacacctggctcatctatcacttaaagatgcgaaccaccagtatcttcctgtat
gactgcaccgaggtgtctccgttctctctgctcttctttggtggtgatatctccatccag
aaggatcaggagcaggagaccatcgcagtggacgaatggatcgtgttccagtctcctgct
cgcatcgctaacctggtcaagaacctgaagaaggagctggatctgctgctggaggagaaa
atcaagcggccacgccccgtggactggagcgaccgaacctccaaagactgtgccgtgatc
tcggccatcatcgacctcatcaccacgcaggagagcgccgtgtcttcacacgagccgtat
cggaaaagccgccagagctgggactag
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