Thermosipho ferrireducens: JYK00_00855
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Entry
JYK00_00855 CDS
T07656
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tfe
Thermosipho ferrireducens
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfe03400
]
JYK00_00855 (radA)
DNA repair and recombination proteins [BR:
tfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JYK00_00855 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA
AAA_14
nSTAND3
SLFN-g3_helicase
AAA_16
AAA_22
AAA_24
Lon_C
RecA
CbiA
AAA_5
ABC_tran
GvpD_P-loop
MMR_HSR1
NTPase_1
KTI12
TIP49
AAA_18
Zeta_toxin
NACHT
MeaB
IstB_IS21
AAA_33
FeoB_N
ArsA_ATPase
NB-ARC
RNA_helicase
cobW
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QTA38124
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All DBs
Position
complement(165077..166402)
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AA seq
441 aa
AA seq
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MSKTKIIYVCDNCGYESPKWFGKCPVCNEWNTAKELKLSNINKAGEESSRFFLLEEISEV
EMFERLITRYSEINNLFGGGVVPGQVILLGGEPGVGKSTLALQLCYELSRYGKVAYITGE
ESAMQIALRAKRLKIENSGIYLSTENNIESVLTNLRKQELTFVVFDSIQTLYSNKVDSAS
GGVLQVRTVVDEVRKFSKDTGIASLLIAHVTKGGNIAGPKLVEHIVDTVIYFEGEKSTDL
RVLRVLKNRFGPSGEIAIFSMSESGLKELKERIFIEESPMPGNTITSLYEGSRPFLVQIQ
SLVSRDKIATARRISHGIDVRKIIIMSAVISKHLNLPVESHDVYANVSGGLKITDSACDL
AIAASILSSFLNKYIGKFVIIGEVGLDGSIRNVHNIKKRIENAIRSGYDKFIIPKKANVP
GSESVIKLGNLKELLNYMIDL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacaaaaattatttatgtttgtgataattgcgggtatgaatctcccaaatgg
tttggtaagtgccctgtatgtaatgaatggaacactgcaaaagagctaaagttatccaat
ataaataaagcgggagaggaaagctcccgcttcttcttgttagaggaaatatcagaggtc
gagatgtttgaacgattgataaccagatactccgagataaacaatctttttggtgggggt
gtagtccctggtcaggtaatattgttaggcggcgagcctggtgttggtaaaagtactctt
gcccttcaattgtgttacgagctttccaggtatggaaaagtggcgtacattaccggggaa
gaaagtgctatgcaaatagcccttcgtgcgaaaagacttaaaattgagaacagtgggata
tatctttccacggagaataacatagaatctgtcctgacaaatctgaggaaacaagagctc
acctttgtcgtttttgactctattcagactctttattctaacaaagttgattctgcttca
ggtggtgttttacaggtcagaacagttgtagatgaggttcgaaaattttccaaggatacc
ggtatcgcttcacttttaatagcacatgtaacaaaaggtggaaatatagccggtcctaaa
ttggtggagcatatagtggatactgtgatttattttgaaggggaaaaaagcactgattta
agggtattgagagtgttgaaaaacagatttggaccaagtggagaaatagcaatattttca
atgagtgaaagcggcttaaaagaattaaaagagagaatttttatagaagaaagtcccatg
ccaggaaatactataacttctttgtacgaaggttcaagaccttttcttgttcaaattcaa
agtttagtctcgcgtgataaaatagccaccgctcgaagaattagtcatggaatagatgtt
agaaaaattataataatgtcggctgttatttcaaagcatttgaatttgcctgttgaatct
catgacgtgtatgcaaatgtttcaggtggtttgaaaataactgattcagcgtgtgatctg
gcaatagctgcatctattttgtcttcttttttaaacaaatatataggcaaatttgttata
ataggtgaagttggacttgatggaagtataagaaatgtgcataacataaagaaaagaata
gaaaacgccataagatctggctatgataagtttattattccaaaaaaggcaaatgttcca
ggttcggagagcgttatcaaattaggaaatttaaaagaattgctcaattatatgattgat
ttataa
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