Thermosipho ferrireducens: JYK00_02385
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Entry
JYK00_02385 CDS
T07656
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tfe
Thermosipho ferrireducens
Pathway
tfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JYK00_02385 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfe03400
]
JYK00_02385 (priA)
Enzymes [BR:
tfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYK00_02385 (priA)
DNA repair and recombination proteins [BR:
tfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JYK00_02385 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_19
Zn_ribbon_6
AAA_30
Zn_Ribbon_YjdM
Guanylate_cyc_2
T2SSE
Zn_ribbon_TFIIB
AAA_25
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
QTA38392
UniProt:
A0ABX7S730
LinkDB
All DBs
Position
complement(474356..476602)
Genome browser
AA seq
748 aa
AA seq
DB search
MVYKVAVSNLNLNKTFLYSSQIKLEIGERVLIDFNGNRRVGYIVQESNEKGAVKSIIERI
DGKSFLEKWRVKILLGVSNFFGAPVGKLFDLCFPKGLDDYFVTYVKSRSPFLGFDNLSVE
SFISKYGKNKLNEFIKQGIVEIVKDFTVRTPRPKKELFVKLISNLEELAYKRLTKKQLMV
VNYLLSTKVVSYEELKAELNINLDVVYQLKRKGIVEIFEERIEQFEKIQLTNLQKEVVNE
IINNPGMHLLMGVTGSGKTEVYIEVMKHYLKMGKVLYLVPETSLIEQTSIRIKTKIPDAK
LGVYHSYLTKAKRVETWIKAVKGDLDILLGTRSAVFVPLKDISLVIVDEFHDESYYQDSN
ITYDTIKILEEFPVPVIFGSATPRIEHYYKAKKGIYYFHRLTERFGTTLPTVEIINMKIE
DKVSPYLSKKVLDEIAEVVKKNEEVMVFVRRKGFSRIVCQNCGYFVKCPNCETSLTYYKS
KGILKCHICGYEQSTISACPSCGSIMLLEKGTGTERMEKELVKHFPGRQIARADTDLIFK
PKLFEKLLKKLILGEIDILVGTKMITKGLDIPKVSLTVVADIDAIATIPDYNSELRAFQL
LVQVTGRSGRKAPGKAVIQTYYPESDILKYAINQDVESFYEIEIKKRRALNYPPFSNIVH
IITSSQNQALGYETAKKIVEELKKSYNDPIIGPTEYLIPKIRNNYLYHFIVKTSNPQKVI
NNIEQLKNKYPTKLFLRVNPPSILTYLH
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
ttggtttataaggtagctgtttcaaatttgaatttaaataaaacgtttttgtattcatcg
cagataaaactggaaataggtgagcgtgttctgatagattttaacggaaatagaagagtt
gggtatattgttcaggagagcaatgaaaaaggcgcagttaaatctatcattgaaagaata
gatggaaagagttttctggaaaaatggcgtgtgaagattcttttaggggtttcaaatttc
tttggtgcgcctgttggaaaactttttgatctatgttttcccaaaggtttagatgattat
ttcgtaacttatgtaaagtcccggagtccttttcttggctttgataacctgtcggtagag
agctttattagcaaatatggaaaaaataagcttaatgaatttataaaacagggaatagtt
gaaatagtaaaagattttacggttcgtactccacgtcctaaaaaggaactttttgtaaaa
cttatttccaatctggaagaactggcatataaacgtttaacaaaaaaacaactcatggtt
gttaattatcttctttctaccaaagtagtatcctatgaagaattgaaggctgaactgaat
attaatttagacgtagtttatcaattgaaaagaaaaggaattgttgaaattttcgaagaa
agaatagagcagtttgagaaaatacagctcacaaacttacaaaaagaagtagtaaatgaa
ataataaataatccggggatgcatttattaatgggagtaactggaagcgggaaaacagaa
gtttatatagaggttatgaaacattatttgaaaatgggtaaagttctttatttagtccct
gaaacatctttgatagaacagacttccattagaataaagaccaaaattcctgatgccaaa
cttggagtttaccacagctatcttactaaagctaaaagagtagaaacctggataaaagca
gtaaagggagatctggatattttacttggtacaaggagtgctgtttttgttcctttgaaa
gatatttctctggtaatagtggatgaatttcacgatgaaagttattaccaggactcaaat
attacttatgatactattaagattcttgaagagtttccagttcccgtaatttttggaagt
gcaacacctcgcatagaacattattataaagcgaaaaaggggatatactattttcataga
ttaacagagaggtttggtactactcttccaacagtagaaataatcaatatgaaaatcgaa
gacaaagtttcgccatatctttcgaaaaaagtattagatgagatcgcagaagttgtaaaa
aagaacgaagaagtaatggtattcgtcagaagaaaaggtttttcacgaatagtgtgtcag
aattgtggatattttgtaaaatgccctaattgtgaaacttcattgacctactataaatca
aaaggcatcttaaaatgtcacatttgtggttatgaacaatctacaatctcagcgtgccct
tcgtgtggttctattatgctacttgaaaaaggtaccggtacggaaagaatggagaaagag
ttagtcaaacattttccaggtagacagatagcaagagctgatactgatctcatattcaaa
ccaaaactttttgaaaaattactaaagaaactgatcttgggagaaattgatattcttgtt
ggtacgaaaatgataactaaaggattggacattcccaaagtatctttaactgttgttgca
gacatagatgcaattgccacaataccggattataattcagagctcagagcgtttcaactc
ctggttcaggttacaggacgttcaggaagaaaagcccctggaaaggctgtgattcaaacc
tattatccagaaagtgatatactgaaatatgcgattaaccaggatgtggagtctttttat
gaaattgaaataaaaaaaaggagagcactaaactaccctccattttcaaacatagtccat
ataataacttcttcgcaaaatcaggctcttggttatgaaacggcaaaaaagatagttgaa
gaattaaaaaaatcgtacaacgatcccattattggaccaacggaatatcttataccaaag
ataagaaataattatttatatcattttatagttaaaacttccaatcctcaaaaagttatc
aataatatagaacagttaaaaaacaaatacccaactaaactttttctaagggtaaatccc
ccatcaattcttacttatttacattga
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