Thermosipho ferrireducens: JYK00_02630
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Entry
JYK00_02630 CDS
T07656
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tfe
Thermosipho ferrireducens
Pathway
tfe03420
Nucleotide excision repair
tfe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JYK00_02630
03430 Mismatch repair
JYK00_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfe03400
]
JYK00_02630
Enzymes [BR:
tfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYK00_02630
DNA repair and recombination proteins [BR:
tfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JYK00_02630
MMR (mismatch excision repair)
Other MMR factors
JYK00_02630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
DEAD
AAA_11
DUF5517
ResIII
CorA
Motif
Other DBs
NCBI-ProteinID:
QTA38439
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All DBs
Position
522602..524515
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AA seq
637 aa
AA seq
DB search
MTPEKFLDLLDSEQQEAVINSTGKVLVIAGPGSGKTRVITYKIAYLIRSGIKPHEIMLVT
FTKAAAREMIQRAKNVSHSTLDGITAGTFHHICNIFLRKYGKTININPNFTILDSEDAKD
IMESARSEIVPKSERKHIPSAKQLLTINSYMNNTLCSLRESIAKLNPKFLEAEHIIEQIL
IKYSAEKNEQNALDYDDLLINTLHILSTDSYIRKRESTKLKWILVDEFQDTNIVQYKIAE
LLSETHGNLMVVGDDAQSIYSFRGARFENVVEFQKNARIFKIQTNYRSSQELVNFINEML
PAKSVPKKLKAIRKTGIKPFLVEVFDHYDEADFVANEILNFHTEGINLNEIAVLYRAHSH
SLELQLALSKLGIPFRIFSGLRFTETAHVKDVLAFLKTTVNPKEKVSWLRVLKLLNGIGK
IKANRISNKIIGSETPYQTLTQIKEKSDDFSKLKKIYQDSLKLENPGDRIKKFYEIFYNE
HLEYTYDNYRERKEDLERLIEMASFYRSTEEFLTDVLVSESFEITNSNLEQLEYDEKVTL
TTVHQAKGLEWKVVFIISVNPGDFPHIMSLRDGNIDEEERLFYVAITRAKDYLYIIYSAG
GSSRILYGNDYILRCGKSFIDKIPFHLVEHIEYKVRR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
ttgacaccggaaaaattcttagaccttcttgactccgaacaacaagaggcggtaataaac
tccactggaaaggttcttgtaatcgcaggcccgggaagcggcaaaacacgtgtaattacg
tacaaaatagcatatctcataagaagcggaataaaacctcacgaaataatgcttgtaacc
tttacaaaagcggctgcgcgtgaaatgatccaacgcgcaaaaaatgtttcacactcaacc
ttagacggaataactgccggtacatttcaccacatatgcaacatattcctgagaaaatat
ggaaaaacaatcaacataaatccaaacttcaccattcttgacagtgaagacgcaaaagac
attatggaaagcgcaagaagtgaaattgttcccaaatctgaacgaaaacacattccatca
gccaaacaactcctgacaataaattcttacatgaacaacaccttatgctcgctccgagaa
tcaatcgcaaaactcaacccaaaatttttagaagccgaacacatcatagaacagatacta
ataaaatactctgcagaaaaaaacgaacaaaatgcacttgattacgatgaccttttaata
aacactctgcatatcctttcaacagactcgtatatccgaaagcgagaatctacaaaactg
aaatggattttagttgacgaatttcaggacactaacattgtccaatacaaaatagcagag
cttttatctgaaactcacggcaatctcatggtagttggtgatgatgcacaaagtatttac
tcctttagaggtgcacgatttgaaaacgttgttgaatttcaaaaaaatgccagaattttc
aaaattcaaaccaattacagaagctcacaggaactggttaatttcataaacgaaatgctc
ccggcaaaatctgttccaaaaaaactcaaagcaatcagaaaaacaggtataaaaccattc
ttagttgaagtttttgaccattacgacgaagcagattttgttgcaaatgaaatcttgaat
ttccatactgaagggattaacttaaacgaaatcgctgtactctacagagctcactcccac
tccttagaacttcaactggctctttcaaaacttggtattccatttaggatattctcagga
ctacgttttacagaaacagcacacgtcaaagatgtacttgcatttctaaaaactactgtc
aatcctaaagaaaaagtttcctggctcagagtattaaagttactaaacggaataggaaaa
ataaaagccaatagaataagcaacaaaattataggctcagaaacaccttaccagacactc
acacaaatcaaagaaaaaagcgatgacttttcaaaattgaaaaaaatataccaggattct
ctaaaactggaaaatccaggtgatcgaataaagaaattttatgaaatattctacaacgaa
cacctcgagtatacctatgataactatagagaaagaaaagaggatctggaaagactaatt
gaaatggcaagcttttacagaagtaccgaagaatttctcacggatgtacttgtaagcgag
tcatttgaaataacaaatagtaaccttgaacaactcgaatacgacgaaaaagttactcta
accacggtgcaccaggcaaaaggtctggagtggaaagttgttttcataataagtgtaaat
cccggagattttccccacataatgtcacttagagatgggaatatcgatgaggaagaacgt
ttattttacgtagctattacccgcgcaaaagattatctgtatataatttacagcgctgga
ggatcatcaagaattttatatggaaacgactacattttaaggtgcgggaaaagtttcatc
gacaaaattccatttcatcttgttgaacacattgaatacaaagtgaggcgataa
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