Thermosipho ferrireducens: JYK00_03525
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Entry
JYK00_03525 CDS
T07656
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tfe
Thermosipho ferrireducens
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfe03016
]
JYK00_03525 (truB)
Enzymes [BR:
tfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JYK00_03525 (truB)
Transfer RNA biogenesis [BR:
tfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JYK00_03525 (truB)
Prokaryotic type
JYK00_03525 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QTA38593
LinkDB
All DBs
Position
complement(706832..707758)
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AA seq
308 aa
AA seq
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MRGILNVYKPKGVTSHDVVDEIRRKLSIKRVGHAGTLDPFAEGVLIIGVGDATRILEYLK
VLEKKYYVKAILGVITETFDITGEVVENKNCDITSQELKDAILSFKGKYLQVPPAYSAKK
YKGKKLYQFARQGNIISLPPKEVEIFDISNIKIELPYFSFKVTTSPGTYIRSLCMDIGYK
VGCGATSVELVRLAVGEYEIQNSINPYENDSQRIKKALIPIEEAITLPKVEVYGEYVENI
FNGVQPRLEFIKEIISPFRKGEDVAIYWQGKIIAIATAERNSKFFKTLYNQERFGERVFT
LKKVFKNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgagaggcatattgaatgtttataagccaaaaggtgtgacatctcatgatgtagttgat
gaaataaggagaaaattatcaataaaacgcgtgggtcacgcaggtacacttgaccctttt
gccgaaggagttttaatcataggggtaggagatgctactcgaatactcgagtacttaaaa
gttctggaaaaaaaatactatgtaaaagctattcttggtgttattacagaaacatttgac
attaccggtgaagtagtagaaaataaaaattgcgatataacatcacaggaacttaaagat
gctattctgtcatttaagggaaaatatttgcaggttcccccggcatattctgcaaaaaaa
tacaaagggaaaaaattgtatcagtttgccaggcaagggaatataatttcgcttccacca
aaagaagttgaaatctttgatatatcgaatatcaaaattgagttaccttatttttcattt
aaagtaactacctcacctggaacgtacataagaagtctctgtatggatatagggtacaaa
gtcgggtgtggagcaacaagtgttgaacttgtaagattagctgttggcgaatatgaaatt
caaaattcaataaatccttatgaaaatgattctcaaaggattaaaaaagctcttattcca
atagaagaagcgataactctaccaaaggttgaggtttatggagaatacgttgaaaatata
tttaacggcgttcaaccacgtctggagttcatcaaagaaataatctcgccatttcgaaaa
ggtgaagatgttgctatatactggcaggggaaaataatagctatagcaacagcggaaaga
aattcaaaatttttcaaaacgctttacaaccaggaacgttttggagaaagagtctttact
ttaaaaaaggttttcaaaaatctgtaa
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