Thermosipho ferrireducens: JYK00_03575
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Entry
JYK00_03575 CDS
T07656
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
tfe
Thermosipho ferrireducens
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfe03036
]
JYK00_03575 (smc)
Chromosome and associated proteins [BR:
tfe03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JYK00_03575 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
Baculo_PEP_C
DUF4200
GAS
ERM_helical
CALCOCO1
EzrA
Fez1
DUF948
TMPIT
Sec8_N
CCP_MauG
MscS_porin
ABC_tran
TMP_3
Motif
Other DBs
NCBI-ProteinID:
QTA38902
LinkDB
All DBs
Position
718547..722047
Genome browser
AA seq
1166 aa
AA seq
DB search
MSLKLQEIYLKGFKSFAHPTRIPISPRISVIVGPNGSGKSNIVDALRWVFGEQSMKELRA
EERSDVIFSGSEKTRPSQNAFVELTFSLNGEIVRIAREITRNGKSGYFLNGDQVRLKDIK
NFINSTEKGMYSIISQGQIDKIVTSSAEDLRKLIEEAAGTAVYRDRKKEALTRLAATEAN
LERIKDILFEVEKNKKSLYLKAKKAERYKEYSEKLSQVKARYFSGVYTHEKRLLDSLSEQ
REELKGNLKATLKELAGIESKWSVLREEFNEIDKEMESFTGLLEDHKKRQMQLLELRETF
TQKLNRYESNYVEIVTKIDSFKEETRRLKTREEEVLMIEKSLNKEIEEKEKVLLELEEKR
EALMSNYSQREMELLKKKQEYDGYEKQLHKIQTEKQHLADLQVDLEKRLKMITEQFISKK
TRLEDLEDEIEELSKSVSKFDESAKKLLDELNEIKNNMEKLTSERENIKEELEELFHRKR
EISSEVQILQKQIDDYQGFSHAVKKVFENKEKFEGIVDVVANIIEVEPQYTEAIEALLGG
VLQHIVVDTAEHAKKIIEFAKRTKIGRLTLIPLDLIEEPGQNQHFDFTKDTQGVIGMARE
LIKINRDKKGLEKLPGYLFGGDIVVKDIDTAIFVKKERKIWGRIATLDGEIVSVKGSMTG
GKSSSNYSLLSRKQKIQKLEEELNRLLNKEEKLQETFENIKKEIEELRNYSEVVSKELIN
LNSQSASSKRMLQELVKTRDEILKEVESLEKLKVEYTQKFEGINARYDIIEKSIKEYMGK
INSLKSMLDDYSKEILEEKEKLDELNSRITDVKMDLTNLMERRIQYDSEIKRIHLRYKEI
ETELGELLREKGNVESEMENLKQILQENEKEIEALKRETEELFESMKYRKSGKEQKFQEV
KKLEEKMEELRNKVEKVREKLHKIDLKIQEKEIKISGIPEEFRNEIIVKENELDELKTQI
EELENKIKYLGSVDLEAEEEYKRVEKEYNDLYLQKEDLESARKKLIDLIEKTDEEARKVF
MGTFNVVNGAFKRYVEQLFYGGTGIMRLTDEANVLDSGVEIVITKAGRRAQKLQLLSGGE
KALVGLALLMALLEAQPSAFYVLDEVDAPLDEYNAEKFRRLLENSRAQFIIVTHNKIVME
AADVLHGVTMVDGVSTIVPVRMEEVV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ctgagcttaaaacttcaagaaatttatctgaaaggttttaaatcttttgcacaccctaca
agaattcctatatcgccaagaatatctgttattgttggaccaaacggttcgggaaagtcg
aacattgtggatgccctacgatgggtttttggcgaacaatcaatgaaagaattacgggct
gaagaaagaagtgatgtaatattttccggtagtgaaaaaacaaggccatcacaaaatgcg
tttgttgaacttacattttctttgaacggtgaaatagtaagaattgccagagaaattacg
agaaatggtaaaagtggttattttctgaacggtgatcaggtacgattaaaagatataaaa
aatttcataaatagtacagaaaagggaatgtattcaattataagtcagggacagatagat
aagatagttacttccagtgcagaagacttgagaaaattaattgaagaagcagcggggacg
gctgtgtatcgtgacagaaaaaaagaagctttaacaaggcttgcagctacagaagcaaat
cttgagagaataaaggatatactctttgaggttgaaaaaaacaaaaagtctttatattta
aaagctaaaaaagctgaaagatataaagaatatagtgaaaaacttagccaggtaaaggcc
cgatattttagtggagtttatactcacgaaaagcggctgttggatagtcttagcgagcaa
agagaagagcttaaagggaacctgaaagcaactttaaaagagttagcaggtattgaaagt
aaatggtctgtacttcgggaagaatttaatgaaatagataaagaaatggaaagttttacg
gggcttcttgaagatcacaaaaaaagacagatgcaacttttagaattaagggaaactttt
actcaaaaattaaacaggtacgagagcaattatgtggagattgtaacaaaaatagacagt
tttaaagaggagaccaggcgtcttaaaacacgtgaagaagaagttttgatgatagaaaaa
tctttgaacaaagaaatagaagaaaaggaaaaagtacttttggagcttgaagaaaagaga
gaagctttaatgtcaaattattctcaaagagagatggaattgttaaagaagaaacaggaa
tacgatggctatgaaaaacagttgcataagattcaaacagaaaaacaacatctggcagat
ctccaggtggatctggaaaaaagattaaagatgataactgaacaatttatttctaaaaaa
acacgtttagaggaccttgaagatgagatagaagaactttcaaaaagcgtttcaaaattt
gatgaaagcgcaaagaaattattagatgaactgaacgaaataaaaaataatatggaaaaa
ttaaccagtgaacgagaaaatataaaagaagaattggaagagttgtttcataggaagaga
gaaattagttcagaagtccagattttgcaaaagcaaatagatgattatcagggattttca
cacgctgtaaaaaaagttttcgaaaataaggaaaaatttgaaggaatagtagatgttgta
gcaaatattatcgaagtagagccacagtatacagaggcaattgaagcattgttaggagga
gttcttcagcatatagttgtcgatacagcagaacatgccaaaaaaataatagaatttgca
aaaagaacaaaaataggacgattaacacttattcctctcgacttgatagaggaacccggg
cagaatcaacattttgactttacaaaggatactcaaggcgttataggtatggccagagaa
cttataaagattaacagagataaaaagggacttgaaaagcttccaggttatctttttggt
ggtgatattgttgtcaaagatattgatactgctatttttgtaaagaaggaaaggaaaatt
tggggaaggatagctactcttgatggagaaatagtaagtgttaaaggttcaatgaccggt
gggaagagttccagtaactattccttgctttcgaggaagcaaaaaatacaaaaactggaa
gaggaattgaatcgtctattaaataaagaggaaaaattacaggaaacttttgaaaacatt
aagaaagaaatagaagaattaaggaactattcagaagttgtgagtaaagaattgataaat
ttaaatagtcagagtgcttccagcaaaagaatgctacaggaattggtaaaaactcgtgat
gaaatattaaaagaagttgaatctcttgagaagttaaaagtagaatatactcaaaagttt
gagggaataaatgcaaggtatgatataattgaaaagagtataaaagagtatatgggaaaa
atcaatagtttaaaatctatgctggatgattatagtaaggaaattcttgaagaaaaggaa
aagttggacgagctaaactcacggataacagatgttaaaatggatttaacaaatctaatg
gagcggcggattcagtatgactctgaaataaaaagaattcatcttaggtataaagaaatt
gaaactgaattgggagaacttttgcgtgaaaaaggtaatgtagaatctgaaatggaaaat
ttaaaacaaattcttcaggagaatgaaaaagaaatagaggctttaaaacgtgaaactgaa
gaattgtttgaaagtatgaaatatagaaaaagtggaaaagaacaaaaatttcaggaagta
aaaaagttggaagaaaaaatggaagagctaagaaacaaagtagagaaggttagagaaaaa
ttacataaaatagatttgaaaattcaggaaaaagaaataaaaataagcggtattccagaa
gaattcagaaatgagataatagttaaggaaaatgaacttgatgagttaaaaacgcaaata
gaagaactggaaaacaaaataaagtatttaggttctgttgatttagaagctgaagaagaa
tataaaagagttgagaaagagtataatgatttgtatttgcagaaagaagatcttgaaagt
gcccgaaaaaaacttatagatcttatagaaaaaacagatgaggaagcccgaaaagttttt
atgggaacttttaatgttgtaaatggtgcgtttaaaagatatgtagagcagttgttttac
ggcgggacaggaattatgcgcttaactgatgaagccaatgttctggattcaggagtggaa
atagttattacaaaagccggtcgacgagcacaaaaactgcagcttttatccggtggagaa
aaagcgttggtagggcttgcgttattaatggctcttcttgaagctcagccaagtgcgttt
tatgtcctggatgaggttgacgctccattagatgagtacaatgctgaaaaatttagaaga
cttcttgaaaattcaagagcgcaatttataattgtaacgcataataaaatagttatggaa
gcggcggatgttcttcatggagttaccatggtggacggtgtatctaccatagttcctgtg
agaatggaggaggtagtatga
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