Thermosipho ferrireducens: JYK00_04250
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Entry
JYK00_04250 CDS
T07656
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
tfe
Thermosipho ferrireducens
Pathway
tfe00500
Starch and sucrose metabolism
tfe01100
Metabolic pathways
tfe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
JYK00_04250 (glgX)
Enzymes [BR:
tfe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
JYK00_04250 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
Arb2-like
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
QTA38726
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Position
complement(857918..860077)
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AA seq
719 aa
AA seq
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MADYPLQYNNPGSEVILKTKRGYPRVGATPDDTGVNFALFSRNAKRVILELYQNYYDDTP
SHRFELDPVYNKTGDIWHIYIYGVKHGQYYGWRVDGDYDPENGKRFNANKLLVDPYAKAV
SSSFDWDESSVYGYDKNSPLLDLSFSKENSAKSPTKSIVIDDSKYDWGNDKQLHIPWEET
IIYEMHVRLFTISPTSKVRFPGTFMGILEKLDHLKELGITTIELMPIFEFNVNANTKINP
KTGEKLKDIWGYNPLCFFAVTGNYSVGLKLGEQVFLFKDFVKELHKNGFEVILDVVYNHT
GEGNELGPTLSFRGIDNEIYYMLNPNNKRYYLNYSGCGNTLNCNHPVVKEMIIDSLRYWA
TEMHVDGFRFDLAAILGRTPEGKWIGDLSLLKDISEDPILHNLKLIAEGWDAAGGYFLGE
FPEGWAEWNGQYRDVVRKFVRGDEGIVTDLATRITGSQDLYGRRMPHASINFITCHDGFT
LRDLVSYNFKHNEENGENNQDGTDENFSFNYGVEGDTDDPEIIKIRKQQIKNFVTILMVS
HGTPMILMGDEMFRTQKGNNNAYCIDNETTWVDWSLKEKHYDIFRFFKKMIEFRKKHHSL
RRKHFFTGLDLSGDGIPDITWHGVKPFQPDWSYSSHSIAFMISGTDFLCKDVPPDNDIYV
ILNQWREPLKFILPFIHEKTWYRVVDTSKDSPYDFLDEPEQVGYVYIAQPRSSVILISK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggctgattatccccttcaatacaataatcctggttctgaggtcattttaaaaacaaaa
cgaggttatccaagagttggcgcgaccccggatgataccggggttaattttgctttgttt
tcaagaaatgcaaaaagagttattctggaattgtaccaaaattattacgatgacacacca
tctcacaggtttgagcttgaccctgtttacaataaaacaggagatatatggcacatttat
atatacggtgtaaaacatggtcaatattatggatggcgagtggatggggattatgaccct
gaaaacggcaaacgctttaatgcaaacaaattattggtagatccgtatgccaaagctgtt
tcgagctcttttgactgggacgagagttctgtttacggttatgataaaaattctccacta
cttgatttatctttctctaaagaaaattctgccaaaagtcctacaaaatcaattgtaata
gatgattcaaaatacgactggggaaatgataagcaacttcacatcccctgggaagaaaca
ataatctatgaaatgcacgtaaggctttttacaataagtcctacatcaaaggtacgtttc
cctggaacttttatgggaatattggaaaagctggatcacctcaaagaacttggaataaca
actatagagttaatgcctatatttgaatttaacgtgaacgccaacaccaaaataaatcca
aaaacaggggaaaagctaaaagatatatggggctataatcctttatgtttcttcgctgta
acaggtaactattcagtcggtttaaaactcggagaacaggtttttctgtttaaagatttc
gtaaaagaattgcacaaaaatggattcgaggttatattagatgttgtttacaaccataca
ggagaaggtaacgaattgggacccactttatcattcaggggcattgacaatgagatctac
tacatgctcaatccaaacaataaaagatattacttaaactactcaggttgtggaaatacc
ctgaattgtaaccaccctgttgtaaaggaaatgataatcgacagtttaagatattgggca
acggaaatgcatgttgatggatttagatttgatcttgccgccatccttggaagaacacct
gaaggcaaatggataggagatttatcccttttaaaggacatttcagaagatcccattcta
cacaacttaaaattaatagcagaaggctgggacgcagctggtggatactttctcggtgaa
ttccctgaaggctgggctgaatggaatgggcaatatagagacgttgttagaaaatttgtt
agaggtgatgaaggcattgtaacagatcttgcaaccagaatcactggaagccaggattta
tatggaagacgcatgccccatgcaagtattaatttcattacttgccatgatggatttaca
ttgagagatttagtatcgtacaactttaaacataatgaagaaaatggagagaacaaccaa
gatggcactgacgaaaatttcagctttaactatggcgtcgaaggagatactgatgatcca
gaaataataaaaataagaaaacagcaaatcaaaaacttcgttacaatattaatggtgtct
cacggcacacctatgattcttatgggagacgaaatgtttcgcacacaaaaaggaaacaac
aatgcctattgtatagataacgaaactacatgggtggattggagcttaaaggaaaaacat
tacgacatattcagattttttaaaaagatgatcgagttcagaaaaaaacatcactccctt
agaagaaaacatttcttcacaggcttagacctttcaggggatggtattccagacataacc
tggcatggtgtaaaaccgtttcagccagactggagctattcttctcactcaattgccttt
atgataagtggtacagactttttatgcaaagacgttccaccagacaatgacatatacgtt
atactcaatcaatggcgagaacctttaaaatttattctaccatttatacacgaaaaaacc
tggtacagggtcgtcgacacttctaaagactctccttatgattttcttgatgaacctgag
caggtaggttatgtttacatagcacagccacgaagttctgtaattcttataagtaaataa
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