Thermosipho ferrireducens: JYK00_05065
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Entry
JYK00_05065 CDS
T07656
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
tfe
Thermosipho ferrireducens
Pathway
tfe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYK00_05065 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfe01007
]
JYK00_05065 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfe03016
]
JYK00_05065 (serS)
Enzymes [BR:
tfe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
JYK00_05065 (serS)
Amino acid related enzymes [BR:
tfe01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JYK00_05065 (serS)
Transfer RNA biogenesis [BR:
tfe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JYK00_05065 (serS)
Prokaryotic type
JYK00_05065 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF1771
FapA
Borrelia_REV
ComA
FUT8_N_cat
S6OS1
DUF2203
COG6_N
Motif
Other DBs
NCBI-ProteinID:
QTA37126
LinkDB
All DBs
Position
complement(1019298..1020572)
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AA seq
424 aa
AA seq
DB search
MIDIKLLRKNPEIFKEALSKRNTSSDVISKILKLDKEWRELTTKVNELKAKRNTLSKLVA
KAKAEKNESEAKRIIDESKEIGEKIKQVEEKQRLIEDEIETLALNIPNIPHESVPYGKDE
NENIVVRTWGTPRKFDFTPKAHWDLGPELGLMDFERAAKLSGARFAVMYGWLARLERALV
QFMLDVHIKEHGYTEVWLPHLVKRDVMLWTGKLPKFEEEAYLIEKDDLFLIPTAEVPLVA
LHAEEILAEKELPKKYVAYTPSYRREAGSYGKDVRGIIRQHQFDKVELVWITTPETSFED
LETLTENAEKILQLLKLPYRVVSLCTGDLGFAAAKTYDLEVWLPSYNDYKEVSSCSNDTD
FQSRRANIRYRGSDNKLHFTHTLNGSGLAIGRTLVAVIENYQNPDGSITVPEVLVPYMGT
ERIP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgatagatattaaacttttaagaaaaaatccagaaatatttaaagaagctttaagtaag
cggaacacgagtagtgatgtaatcagcaaaatattaaaattagacaaagagtggcgcgaa
cttaccacaaaagtcaatgaactaaaagcaaaacgaaacaccctctcaaaattggttgcc
aaagcaaaagccgaaaaaaatgaatcagaagcaaaaagaattattgatgaaagtaaagaa
ataggagaaaaaataaaacaggtagaagaaaagcaacgactaatcgaagatgaaatagaa
acacttgctttaaatattcctaacattccgcacgaaagtgtgccttatggaaaagacgaa
aatgaaaacattgttgttagaacatgggggactcccagaaaatttgattttactccaaaa
gcccactgggacttaggtcctgagcttggtcttatggattttgaacgcgctgctaaatta
agtggagcaagattcgctgtcatgtatggttggcttgctcgccttgaaagagctttagtt
caatttatgttagatgttcacataaaagaacatggatacacagaagtctggctcccacat
cttgtaaaaagagacgtaatgctctggaccggtaaattaccaaaatttgaagaagaagcg
tatcttatagaaaaagatgatttattcttaatcccaacagctgaagtgcctttagttgcc
cttcacgcagaagaaatattggcggaaaaagaactgccaaaaaaatacgtagcttacacc
ccatcctatcgtagagaggcaggcagttatggaaaagacgtaagaggaataattagacaa
catcaatttgataaagttgagcttgtatggattaccacaccagaaacttcttttgaagac
ctggaaacattaactgaaaatgcagaaaaaatattgcaattactgaaactcccttataga
gtcgtctctttgtgtacaggggatcttggatttgcagctgctaaaacgtacgatctggaa
gtctggttaccatcttataatgattataaagaagtttcttcatgtagcaatgacactgat
tttcagtcacggcgagcaaatataagataccgaggctcagacaacaaactccacttcaca
cacacattaaatggttccggactcgccattggaaggacacttgtcgctgtaattgaaaac
tatcaaaatcctgacggctcaattacagttccagaagtactcgtaccttatatgggaaca
gaaagaataccttaa
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