Thermosipho ferrireducens: JYK00_05235
Help
Entry
JYK00_05235 CDS
T07656
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tfe
Thermosipho ferrireducens
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfe03019
]
JYK00_05235
Messenger RNA biogenesis [BR:
tfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JYK00_05235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
Cas3_HD
DUF1400
FANCI_S3
Motif
Other DBs
NCBI-ProteinID:
QTA37157
LinkDB
All DBs
Position
1054574..1055593
Genome browser
AA seq
339 aa
AA seq
DB search
MKLPKELIEKYREPYISELNNYINTGVELIVKVKSKRLMETRNGQKYLLMTFEDRSGMVR
AIDWYNAEKNDTKVDVGSVIRVSGKVVIYDGRLQFNLSENIPLIVLKEGEYDLERFVLRG
KKDPEEILKEILSLINTIHNEKLNQLLKEFFEKDEKFIVQFKNCPAGARVHHNYVGGLAE
HSYTVAQLCDNVCKVYMWLDRDLLIAGALLHDIGKVKDYEITPRGIEVTTQGELIGHIVS
GYEMVRKKLNKINADEGLSLRLLHIILSHHGELEWGSPVVPKTPEAYVLHMIENMDSKLN
RISFIKERELEIDPKKNWSDYDTNLGRRFFLKHEIQKEQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattgcccaaggaattgattgaaaagtatagagagccttacatttctgagttgaat
aattatatcaataccggggtagagttgattgtaaaagtaaagagtaaaaggctaatggaa
acccggaatggtcaaaaatatcttttaatgacttttgaagatcgttctggtatggtgagg
gcaattgattggtataacgcagaaaaaaatgatacaaaggtggatgttggtagtgtaata
agagtttcaggcaaggttgttatttatgatgggcgtttgcagtttaatctttcagagaat
attcctttaattgtgcttaaagaaggtgaatatgatcttgagcgcttcgtacttcgaggg
aaaaaggatccagaggaaatcctaaaagaaatactgtctttgataaatactatacacaat
gagaaacttaatcaacttttaaaagaattctttgaaaaagatgagaaatttattgtgcaa
tttaaaaattgtcctgctggagcaagggttcatcataattacgtagggggacttgcagag
cattcttatactgtggcacagctctgtgataacgtttgtaaagtttatatgtggttagac
agagatctattaatagctggagcacttttacacgatattggaaaagtaaaagactatgaa
ataactcccagagggatagaagttactactcagggtgagttaattggtcacatagtttcc
gggtatgaaatggtaaggaaaaaacttaataaaattaacgctgatgagggattatcactt
cgcttgttgcatataatcctttctcatcatggagaacttgaatggggttcaccggtggtt
ccaaaaactcctgaagcttatgttttacatatgattgagaatatggattcgaaacttaat
agaatatcttttataaaagaaagggaattagaaatagatccgaagaaaaactggagcgat
tatgatacaaatcttggaagaaggtttttcttaaaacacgaaatacaaaaagagcaataa
DBGET
integrated database retrieval system
