Thermosipho ferrireducens: JYK00_05925
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Entry
JYK00_05925 CDS
T07656
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
tfe
Thermosipho ferrireducens
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfe03009
]
JYK00_05925
Ribosome biogenesis [BR:
tfe03009
]
Prokaryotic type
ribosomal protein modification factors
JYK00_05925
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
HTH_47
HTH_24
NirdL-like_HTH
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QTA37281
UniProt:
A0ABX7S631
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All DBs
Position
1191190..1193397
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AA seq
735 aa
AA seq
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MSNLLPALDSFAILHSPEGCLLWGIDRILSLKVPATRVDQVVSVLKLFDGTHSIQQIASL
VGIPERAVLDIYNKLNELGVIYKGNDVQQYQQPLQLEIPQHICLSSIVVVGTGLCATTFI
SKLPITQLVGPESSLDQINSLRKHTSVIVALADGPCLAPFKLAEKLARQWKIPWIAGFLY
GGTALAATFLPGSGCLNCVLSRCQSMVKEEKYWNILFYALEKAGWTGVPVITYQHDQRAH
FVLVDLVLRLLNRLQQNGKAECVINTKVGIEGESSNKLPQPLTIYRQDTWSNKEHKYLIL
PMFSCQHCHLPLSKRKSFVWQQALKLGLICELKSVDRSSKDPPLPFFVALGPAAHAFSPA
KDAIVIGGALSITKEDAKMRAVAEALERYCGLCFKPDYLQSERYTKLGILALNPRLIALF
TDEQYQMPDFPFRHPNDVGSITWVQGKFLLTGEPVLVPAQFVYIGYARAVGEPELDNLLS
TGLAAGRSFEEATLNALLEVIERDAFMIAWLNKMQCPPLSCDILPEELTQILTKINDLEL
ELRLWLLPTDVQVEVVCACIRDLRGRLPAAAFGVAASSTRSQAAKKATLEALMVRRSLQI
LLRHRSPETYRNFERIEHAVDSALLYTLPEMESGYEFLLESHTPPPPPKDRDDLTLNKLV
NELSALGLQPIVVDITTKDVRYVGLHVVRVLVPGMQPLDVCYRARHLGGKRFKQMAKTVG
WPCASSWNVYPQPLG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacctgttacctgctctcgactcctttgctatcttgcatagccccgaaggttgt
ctgctctggggtatagaccgaattttatcacttaaggtgcctgcaactagggtagaccaa
gtagtaagtgttcttaagcttttcgacggaactcactccattcaacaaatcgcatcgttg
gttggtatacccgagcgtgctgttttagatatatacaataaactgaatgaacttggtgtg
atatataaaggtaatgatgtacaacaataccagcaaccactgcaactagaaattccgcag
catatttgtttgtcctccattgtagtggtcggtacaggactgtgtgctacaacatttatt
agcaagttgcctataacccaattggtgggcccagagagttcattagatcagattaactca
cttcgaaaacacacaagtgttattgtcgcattagctgacggtccttgtcttgctcctttc
aagttagcagaaaaattagcacggcaatggaaaataccttggattgctgggttcttgtat
ggaggaaccgcccttgctgcaacttttctaccggggagcggttgtcttaattgtgtacta
agtcgctgccaatcgatggtaaaagaggagaagtattggaatattttgttttatgcactc
gagaaagctggctggactggtgttccagtaattacttatcagcatgatcaacgagctcat
ttcgtgctcgtggatttagtattacggcttctaaaccgattacaacaaaatggcaaggca
gagtgtgtaataaacacgaaagttggaattgaaggagagtcgtccaacaaactaccccaa
cctcttactatttatcgacaggatacttggtcaaacaaagaacataagtaccttatcttg
cctatgttttcttgtcaacactgccatttgccactttcaaaaagaaaatcatttgtatgg
cagcaagcgctcaagttaggactgatctgtgagttaaaatcagttgatagatcaagtaag
gatcctccgctaccattctttgtcgccttaggaccagcagcgcatgctttttctccagcg
aaagatgcaatagtcattggcggcgcattgagcataaccaaagaggatgcaaaaatgaga
gccgtcgctgaagcattagaaagatactgcggactttgcttcaaaccagattacttgcaa
tctgaacgttacacaaaattgggaattctagcacttaaccctcgtctaattgcactgttc
acagatgagcaataccaaatgccagatttcccatttcgccatccaaatgacgttggatca
ataacttgggtgcagggaaagtttctacttacaggggaaccagtattagtaccggcccag
tttgtttacataggatatgcgcgagcagttggtgaaccagaacttgacaatttactttct
actggcctagcagccgggcgttctttcgaagaagcgactttgaacgcactcttggaagtt
attgagcgagatgcttttatgatcgcttggttaaataaaatgcaatgtcctcctttaagt
tgcgatattttaccagaagaactaactcagatattaacaaagataaacgatttggaattg
gaactgcggttatggttactacctacagatgtccaagtagaagttgtttgcgcttgtatt
cgtgatcttagagggagacttccagccgcagcctttggtgttgctgcttcatctactagg
agtcaagcggcaaaaaaggcaacgctagaagccctcatggtgcgccgttcgttgcaaatc
ttactaaggcatagatccccagaaacctaccgtaactttgagcgcatagaacacgctgtt
gattctgctttgctttacacattaccagaaatggagtctggatacgaatttttgcttgaa
tcacatactcctcctccaccaccgaaagatagagatgatttaacattgaataagctggtt
aacgaattaagcgcattgggcttgcaacccatagtagtcgatataacgactaaggatgtc
cgctatgttgggttacatgtggtgcgagtactggtccctggtatgcaacctttagacgtt
tgttatcgagcacgacatctgggaggcaagaggtttaaacaaatggcaaagaccgtaggt
tggccgtgcgcatcaagttggaatgtctacccgcaacctcttggttaa
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