Thermosipho ferrireducens: JYK00_08995
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Entry
JYK00_08995 CDS
T07656
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
tfe
Thermosipho ferrireducens
Pathway
tfe02020
Two-component system
tfe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYK00_08995
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JYK00_08995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfe03021
]
JYK00_08995
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tfe02035
]
JYK00_08995
Transcription machinery [BR:
tfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JYK00_08995
Bacterial motility proteins [BR:
tfe02035
]
Flagellar system
Flagellar assembly proteins
Stator
JYK00_08995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
MarR_2
DUF6262
PCI
HTH_Crp_2
Mx_ML
Sigma70_r3
HTH_WhiA
UPF0122
wHTH-PRTase_assc
HTH_10
Phage_rep_O
HTH_15
HTH_IclR
Fib_alpha
HTH_36
DUF7645
DUF1451
ACS_CODH_B_C
Motif
Other DBs
NCBI-ProteinID:
QTA37844
UniProt:
A0ABX7S6M0
LinkDB
All DBs
Position
1837263..1837943
Genome browser
AA seq
226 aa
AA seq
DB search
MINKESVVKEFLPYVKKIALDLKKNLPHNVEVDDLVQEGLLALLQAVEKYDPRKGAKLRS
YILTRVRGAMYDYLRSIDWMPKNLRHNIKLVEEAILSLEKKGKEISFEKLAEETGLTKEN
VVRAYNEMVRKQFLRLDEYITEDLTTVDTIASDDNPEENAFKELLKEKLKEAIKKLDKKE
QMVLSLRFEYELSLKEIGKILEVTESRISQIISSAIAKLKKFLGGS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaacaaagaatctgtggtaaaagagtttttaccatatgtaaaaaaaatcgcttta
gatttaaaaaagaacttgcctcacaacgttgaagtggatgatttagtgcaagaaggactt
cttgcattactacaggcagtagaaaaatacgatccgcgaaaaggagcaaaacttcgttct
tatatacttacaagagtcagaggggcaatgtatgattatttaagaagtattgactggatg
ccaaaaaatttacgtcataatattaaactcgtagaagaagcgatactcagcctcgaaaaa
aaaggaaaggaaatatcatttgaaaaattagcagaagaaactgggttgacaaaggaaaac
gttgttagagcttataacgaaatggtcagaaagcaatttctaagactcgatgaatatatt
acagaagatttaaccacagtcgatactatagcctcagatgataatccggaagaaaatgcg
tttaaggagttattgaaagaaaagctgaaagaggcgataaaaaaattagacaaaaaagag
caaatggttttaagtttacgatttgaatatgaactttcactcaaagaaataggaaaaatt
ctggaagtaacagagtcaagaatatcacaaataattagttctgctatagcaaaattaaaa
aaattcttagggggaagttag
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