Thermosipho ferrireducens: JYK00_09155
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Entry
JYK00_09155 CDS
T07656
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
tfe
Thermosipho ferrireducens
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
Sigma54_activ_2
PAS_9
PAS_8
PAS_4
HTH_8
PAS_10
PAS_7
AAA_2
AAA_5
AAA
HTH_50
HTH_30
SAF
AAA_16
sCache_3_3
Motif
Other DBs
NCBI-ProteinID:
QTA37873
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Position
complement(1868310..1870001)
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AA seq
563 aa
AA seq
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MELVKFFRTVLESIIEGVIIVDEDARVLYFNKMAARLLNLPSDIVGKPVTEVVPNTRLHI
VVRTGIPEIDKIQHAGESVIITSRMPLKDLEGNVVGAVAVFRDITSVKKLAEEITDLHEI
EARLKAIIDSTYDAISVADEYGNVVLVNKAYTEITGLKPEEVIGKPATVDIAEGESIHIL
ISKTKKPIYGARLKVGPAHKEVVVNATPLFVKGKFSGSVAVVHDVSKIISLTKELEEVRR
MMRHLKAQYTFEDIIGDSEKFVMAKEQALKVANTPATVLLRGESGTGKELFAHAIHNASF
RRNGPFVSVNCSAIPESILESELFGYEEGAFTGAKRGGKKGLIEEANGGTLFLDEIGKMP
VQLQAKILRFIERKEFMPVGGSKPKRVDVRIIAATNMDLESMVKKGEFLPDLYFRLNVFP
IHLPSLRERKKDIPALAMYMVKKIGQQYGRVVDGISPAAIRYLVSYDWPGNVRELENIIG
RAIINMNMNENVIEKRHLPPLHLETSVESYKIEGPLKVLVEDFERKVIEKVLKENNGDRT
KTAEKLGISIRTLYYKIERYGLK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
ttggagcttgtaaaattttttagaacagttttagaatccatcatagaaggtgtaattatc
gttgatgaagacgcgcgcgtcctatattttaataagatggcagcgcgtcttcttaattta
ccaagtgatattgttgggaaacctgtgactgaagtggttccaaataccagattgcatatt
gttgttcgaacaggtattccagaaatagataaaatacaacacgctggagaaagtgtgatt
ataacctcaagaatgccattgaaagacttagaaggaaatgttgtaggagcggttgcagtt
tttcgtgatattacaagtgtgaaaaaactggctgaagaaataactgatttacacgagata
gaagcgcgacttaaagctattattgattctacctatgatgcgatttctgttgccgatgaa
tatgggaatgttgtgcttgttaacaaagcgtatacagaaataacaggccttaaacctgaa
gaggtaataggaaagccggcaactgtagatatagcggaaggagaaagtatacatatccta
atttcaaaaacaaaaaagcctatttacggcgcgcgattaaaagttgggccggctcataaa
gaagtggttgtaaatgcgacgcctctttttgtgaaaggtaaatttagtggaagtgtggct
gtagtacacgatgtttcaaaaataataagtcttacaaaagaacttgaagaagtaagaaga
atgatgaggcatttgaaggcccaatacacatttgaggatattataggcgatagcgagaaa
ttcgtaatggccaaggagcaggcgcttaaagtcgcaaataccccagctactgtgctttta
aggggagaaagtggaactggaaaggagttatttgcacatgctattcacaatgcaagtttt
aggcgtaatggtccctttgttagtgtcaattgctccgctataccggaaagcattctggaa
tctgaactttttggatatgaagagggagcttttaccggggcaaagcgtggcggtaaaaaa
ggattgatagaggaggcaaatgggggcacgcttttccttgatgaaataggaaagatgcca
gttcaacttcaggctaagattttaaggtttattgaacgaaaagagtttatgcctgtaggt
ggaagcaaaccaaagagagttgatgtgcggataatagcagctactaatatggatttagaa
agtatggtaaaaaaaggtgaatttcttccagatttatattttagattaaatgtattcccg
atacatctaccttctttgagagaaagaaaaaaagatatccccgcacttgcaatgtatatg
gtaaaaaagataggtcaacaatacggacgtgtagtagatggtatttctccagcagctata
cgatacttagtttcatatgattggcctggaaatgtgagagagctggaaaacattattgga
agggcaataataaatatgaatatgaacgaaaatgttatagaaaaaaggcatttaccacct
cttcatttagaaacgagtgtagagtcatataaaatcgaagggccacttaaagttcttgta
gaagattttgaaagaaaagttatagaaaaagtgcttaaagaaaacaatggtgataggaca
aaaacagcagaaaaacttgggataagtataagaactttgtattataaaatagagcgctac
ggattaaagtaa
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