Tenacibaculum finnmarkense: PJJ26_01265
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Entry
PJJ26_01265 CDS
T08880
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tfi
Tenacibaculum finnmarkense
Pathway
tfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PJJ26_01265 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfi03400
]
PJJ26_01265 (mutS)
DNA repair and recombination proteins [BR:
tfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PJJ26_01265 (mutS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
ATPase_2
AAA_14
AAA_29
GARS_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WCC42523
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Position
complement(130630..133248)
Genome browser
AA seq
872 aa
AA seq
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MAKKTAKKVTPLMQQYNGIKKKYPDAMLLFRVGDFYETFGDDAVKASSILGIVLTKRSAG
SASEIALAGFPHHSLNTYLPKLVKSGLRVAICDQLEDPKMTKSIVKRGVTELVTPGVALN
DEVLQAKSNNFLAAVHFGKKLIGISFLDVSTGEFLIAQGNQEYIDKLLQNFSPSEVLVEK
KYKQQFSELFTNRFHTFYLEDWVFQKDYGNELLSTHFKVKNLKGFGVESLEQGIVAAGAA
MYYLSETQHNKIQHIQSISRIAEDNYVWMDRFTVKNLELYGGNALNSVSLLNVIDKTISP
MGGRLLKRWLALPLKDLTQIQERHELVAFLIDNESFFETVTYQLKQISDIERLISKVATG
KVSPREVILLKNSLKAILPIKASAEKSTNKTVKEIGKKLHDCEILITKIIKTIFEDAPVN
INKGNAIASGVSDELDELRSISNSGKEYLEMMLARETERTGITSLKIAFNNVFGYYIEVR
NTHKDKVPQEWIRKQTLVNAERYITEELKEYETKILGAEDKIQQIEADIFSKLVQFIIDF
VQPVQQNAQNIAKIDVLLSFAKLAMDNNYVRPEMDNSTDIDIKNGRHPVIEKQLPIGEEY
IANDVVLNRDTQQIIMITGPNMSGKSAILRQTALIVLLAQMGSYIPAQSARIGMVDKIFT
RVGASDNISMGESTFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAIAEYL
HEHPSKGKTLFATHYHELNEMTSSFKRIKNFNVSVKELKDSIIFLRKLVEGGSNHSFGIH
VAKLAGMPNLVITKAQKILKQLEANNAHKDVKEVKDVLKESQQEDMQMSFFQLDDPLLEE
VRDEILATNIDTLTPIEALMKLNEIKRMLIKK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaaaaaccgcaaaaaaggtaactccattgatgcaacaatacaacggaattaag
aaaaaatatcccgatgcaatgttactctttagagtcggagatttttatgaaacctttggt
gatgatgccgtaaaagcatccagtattttaggaattgttttaacaaaaagaagtgcagga
agcgccagtgaaattgcgttggcaggttttccgcatcattcgttaaatacctatttacct
aaattagtaaaatcgggtttaagggttgctatttgcgatcagttagaagatccgaaaatg
acaaaaagcatcgtaaaaagaggcgttaccgaattggttacaccaggggttgctttaaat
gatgaagttttacaagcaaaatcaaataactttttagccgccgtacattttggtaaaaaa
ttaataggaatttcttttttagatgtttctacaggtgagtttttaattgcccaaggaaac
caagaatatattgataaacttttacaaaatttttcgccaagcgaagttttagttgaaaaa
aaatacaaacaacaattttcagaattgtttacaaatcgttttcataccttttatttagaa
gattgggtttttcaaaaggactatggaaatgaattattaagtacgcattttaaggttaaa
aacttaaaaggttttggtgttgaatctttagaacaaggtattgttgctgctggtgcggca
atgtattatttatcagaaacacaacataataaaattcaacacatacaatcgatcagcaga
attgccgaagataattatgtttggatggacaggtttaccgttaaaaacctagaattatac
ggcggaaacgctttaaattccgtctctttattaaatgtaattgataaaacaatttcgcct
atgggcggacgtttattaaaacgttggttggctttgcccttaaaagatttgacgcaaata
caagaacgtcatgagttggtcgcttttttaattgataatgaatctttttttgaaacggta
acctatcaattaaaacaaatttctgatatcgagcgattaatttcaaaagttgccacagga
aaagtatcgccaagagaagttattttattgaaaaattccttaaaagctattcttccgata
aaagcatccgcagaaaaaagcacgaataaaacagttaaagaaataggaaaaaaattacac
gattgtgaaattttaattactaaaatcatcaaaactatttttgaagatgcacctgtaaat
atcaataaaggaaatgctattgcaagtggtgtttctgatgaattagatgaacttcgtagt
atttctaattcaggaaaagaatatttagaaatgatgttggctcgtgaaaccgaaagaacg
ggaatcaccagtttaaaaattgcttttaataatgtttttggctattatattgaagttaga
aatacccataaagacaaagttccacaagaatggattcgtaagcaaactcttgtaaatgct
gagcgatatattaccgaagaactcaaagaatacgaaactaaaattttaggagcagaagat
aaaattcagcaaatagaagcggatattttttcaaaattagtgcagtttattattgatttt
gtacaacctgttcagcaaaatgctcaaaatattgctaaaatagatgtgttattatcattt
gccaaattggcgatggataataattatgtacgtccagaaatggataatagtaccgatatt
gacattaaaaatgggcgtcatcctgtaatcgaaaaacaacttccaattggcgaagaatat
atagccaatgatgttgttttaaatcgtgatacgcaacaaataattatgattaccggacca
aatatgtcgggtaaatctgcaattttacgccaaaccgctttaatcgttttattagcacaa
atgggaagttatattcctgcacaaagtgctagaattggtatggtagataaaatttttacc
agagttggcgcaagcgataatatttcgatgggagaatctacttttatggtagaaatgaat
gaaacagcatcaattttaaataatatatcggaacgtagtttggttttattagatgaaatt
gggcgtggaacttctacttatgatggaatttcaattgcttgggctattgccgaatattta
cacgaacatccatcgaaaggaaaaacgttatttgcaacccattatcatgaattaaatgaa
atgactagcagttttaaacgtatcaaaaactttaatgtatcggtaaaagaattaaaagat
agtattatttttttacgaaaattagtagaaggcggaagtaatcatagttttggaattcat
gtagcaaaattagcaggaatgccaaatttagtgattacaaaagcacaaaaaattctaaaa
caattagaagcaaacaacgctcataaagacgtaaaagaggttaaagatgttttaaaagaa
tcgcaacaagaagacatgcaaatgagcttttttcaattagatgatcctttattagaagaa
gttagagatgaaattttagccacaaatattgacacccttacgccaattgaagctttaatg
aaattgaatgaaattaagcgaatgcttattaaaaaatag
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