Tenacibaculum finnmarkense: PJJ26_01390
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Entry
PJJ26_01390 CDS
T08880
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
tfi
Tenacibaculum finnmarkense
Pathway
tfi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PJJ26_01390 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfi01007
]
PJJ26_01390 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfi03016
]
PJJ26_01390 (trpS)
Enzymes [BR:
tfi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
PJJ26_01390 (trpS)
Amino acid related enzymes [BR:
tfi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
PJJ26_01390 (trpS)
Transfer RNA biogenesis [BR:
tfi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PJJ26_01390 (trpS)
Prokaryotic type
PJJ26_01390 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
WCC42547
LinkDB
All DBs
Position
complement(162174..163142)
Genome browser
AA seq
322 aa
AA seq
DB search
MSRILTGVQSTGTPHLGNLLGAILPAIEMANDAKNESYIFIADMHSLTQIKDGNELRENT
YSVAATWLACGIDINKTVFYRQSDIPQVTELSWYLSCYFPYQRLTLAHGFKDKSDRLADV
NSGLFSYPMLMAADILLYDAEIVPVGKDQLQHLEMARDVASRLNNTVGETLILPQGKTNE
NTKLVPGTDGEKMSKSRNNFINIFLADKKLRKQIMGIQTDSKALEEVKNPDTDNVFAIYK
LLASDAQIAEMRANYEGGNYGYGHAKQALYELIIEEFAEVRTKYAYYMENRNEIDKALAI
GAEKARVVAADVLQRVRKKIGY
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaattttaacaggagtacaaagtacaggaactccacacttagggaacttatta
ggtgccattttaccagccattgaaatggcgaatgatgctaaaaatgaatcgtatattttt
attgcagacatgcactcgttaacccaaattaaagacggaaacgaattaagagaaaacacg
tatagtgtagcagctacttggcttgcctgcggaattgacattaataaaactgttttttat
cgacaaagtgatattcctcaagtaaccgaattatcatggtatttgagttgttattttccg
tatcaacgtttaacattagcgcatggttttaaagataaatctgatcgtttagccgatgta
aatagtggtttatttagctacccaatgttaatggctgccgatattttattatatgatgcc
gagattgttcccgtaggaaaagaccaattacaacatttagaaatggctcgtgatgtagct
agtagacttaacaatactgttggcgaaaccttaattttaccccaaggaaaaaccaacgaa
aacaccaaattagttccaggaacagatggtgaaaaaatgagtaaatcaagaaataatttt
atcaatattttcttagcggataaaaaattacgcaagcaaataatgggaattcaaaccgat
agcaaggcgcttgaagaggttaaaaaccctgatacggataatgtttttgctatttataaa
ttactagcttcggatgctcaaattgctgaaatgcgtgccaattatgaaggtggaaattat
ggatacggtcatgcaaaacaagcattatacgaactaattattgaagagtttgctgaagtt
cgtacaaaatatgcgtattacatggaaaacagaaacgaaatagataaagccttagcaatt
ggtgccgaaaaagcccgtgttgtagctgctgatgttttacaaagagttcgtaaaaaaata
ggatattaa
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