Tenacibaculum finnmarkense: PJJ26_02280 Help Entry PJJ26_02280       CDS       T08880                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism tfi  Tenacibaculum finnmarkense Pathway tfi02020   Two-component system tfi02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:tfi00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     PJJ26_02280 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     PJJ26_02280 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tfi03021]     PJJ26_02280 (rpoN) Transcription machinery [BR:tfi03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      PJJ26_02280 (rpoN) BRITE hierarchy Motif Pfam:  Sigma54_CBD Sigma54_DBD Sigma54_AID TFIIF_beta SF3b1 T3SSipB MarR Motif Other DBs NCBI-ProteinID:  WCC42703 LinkDB All DBs Position complement(355236..356708) Genome browser AA seq 490 aa AA seqDB search MLKQSLHYKLLQKLSPQQIQLMKLIQLPTQAFEERLKQEIEENPALDTGKEEPENFEDTL TDADSDDYNNDEGTEKIDTDDINIDEYLSDDEYPSYKTQANNYSADDQERQIPYAAGTSF HQSLNNQLTTFRINEEERAIADFLVGSIDDSGYIRREIIDLVDDLAFTQNVFTSEEKVEN VLINVVQKLDPVGVGARDLKECLIIQLKSKSAKQTRTLAIDILENAFDHFVKKHYKKLLE KFNIDEDYLKEIIAEIGKLNPKPGSSYAGNNKLAEQIVPDFSIQIVDGTLELTLNSRNAP ELHVSREYNNMLKGYSDATKKSKTQKDAVMFIKQKLDAAKWFIDAIKQRQQTLLITMNAI MLRQEAYFLTGDERKLKPMILKDIADEIHMDVSTVSRVANSKYVTTPYGTKLIKVFFSES MKNDQGEDVSTREIKKILETVIQEEDKRKPLTDEKLSKILKEKGYPIARRTVAKYREQLD ISVARLRKEI NT seq 1473 nt NT seq  +upstreamnt  +downstreamnt atgctaaaacaaagtttacattataaattacttcaaaaattatcgcctcaacaaattcaa ttaatgaagttgattcaattgcctacccaagcttttgaagagcgtttaaagcaagaaatt gaagaaaaccctgctttagatactggtaaagaagagcctgaaaactttgaagacacctta acagatgccgattctgatgattataataatgatgaaggaactgaaaaaatagatactgat gatatcaatattgatgagtatttaagtgatgatgagtatcctagttataaaacgcaagca aataattattcggctgatgatcaagaaagacaaattccgtatgcagcaggaacaagtttt catcaatcgttaaataatcaattaaccacctttagaattaatgaagaagaacgcgctatt gccgattttttagtaggaagtattgatgacagcggctatatccgtagagaaattatcgat ttagtggatgatttagcttttactcaaaatgtttttacatccgaagaaaaagtagaaaat gttttaattaatgtggttcagaaactagaccctgttggtgttggtgctcgtgatttgaag gaatgtttaattattcaattaaaatcaaaatcggcaaagcaaacaagaactttggctatt gatattcttgaaaatgcttttgatcactttgttaaaaaacattataaaaaactactcgaa aagtttaatattgatgaagattatttgaaagaaataattgccgaaatcggaaagttaaac ccgaaacctggtagttcgtatgctggtaataataaattagccgaacagattgttcccgat ttttcaatacaaattgttgatggtactttagaattgaccttaaactcgcgaaatgctcct gaactgcacgtttcacgagagtataacaatatgttaaaaggctatagcgatgctacaaaa aagagcaaaactcaaaaagatgccgtcatgtttattaagcagaaattagatgctgctaaa tggtttattgatgctataaaacaacgtcagcaaaccttgttaattactatgaacgctatt atgttacgtcaggaagcgtattttttaacgggtgatgagcgtaagctaaaaccaatgatt ttaaaagatattgctgatgaaatacacatggatgtttctacggtttcaagggttgccaat agtaaatatgtaacaactccttacggaacaaaactgataaaagtatttttctcggaatcg atgaaaaatgatcaaggtgaagatgtttcaacacgtgaaattaaaaaaatattagaaacc gttattcaagaagaagataaacgcaagccacttacagacgaaaaattatctaaaatatta aaagaaaaaggctatcctattgctcgaagaacggttgctaagtaccgtgagcaattagat atttcggtagcaagattgcgtaaagaaatataa

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