Tenacibaculum finnmarkense: PJJ26_02455
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Entry
PJJ26_02455 CDS
T08880
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tfi
Tenacibaculum finnmarkense
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfi03400
]
PJJ26_02455
Enzymes [BR:
tfi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PJJ26_02455
DNA repair and recombination proteins [BR:
tfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PJJ26_02455
Prokaryotic type
PJJ26_02455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
SNaCT1
Motif
Other DBs
NCBI-ProteinID:
WCC42736
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Position
388452..389738
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AA seq
428 aa
AA seq
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MTNKVAIFWFRRDLRLEDNVALFNALNSSNKVLPIFIFDEEILDKLPENDARVSFIYQTL
QQLDTDLKAVGSSLLIKKGNPLKIWKTITSEFDVSAVYTNKDYEPYGLQRDAEISDFLKS
KSIDFLSYKDQVIFEKAEVTKNDGLPYTIYTPYKNKWLQKFNAEEDLKNHAINFNNFHQF
TSKTPSLKLIGFNESSIKVKSYNLSNLASYDEIRDFPFIDKTSYLSPYFRFGLVSVRKMV
QFALKTNATFLNELIWREFFMQVLFHFPKVVTNNFKQKYDAIPWRNNQAEFEKWCKGETG
YPMVDAGMRQLNKTGYMHNRVRMITAGFLCKHLLIDWRWGEAYFAQKLLDYELSANNGNW
QWAAGTGCDAAPYFRVFNPEAQLKKFDKDLQYIRKWIENFDELNYPQPMVEHKFARERAI
STYKEALN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaagtagcgatattttggtttcgtagagatttgcgtttagaagataacgta
gcattatttaacgctttaaattcatcaaataaagtactgccaatatttatttttgatgaa
gaaattttagataaactaccagaaaacgatgcccgagtttcatttatttatcaaacatta
cagcaattagataccgatttaaaagcagtcggttcatctttattgataaaaaaaggaaat
cctcttaaaatatggaaaacaataacatcagaatttgatgtttcggcagtttataccaat
aaagattacgaaccgtatggattacaaagagatgcagaaattagcgattttttaaaatca
aaaagtattgattttttaagttataaagaccaagttatttttgaaaaagctgaggttacc
aaaaatgacggattgccatataccatttatacgccgtataaaaataagtggttgcagaaa
tttaatgccgaagaagatttaaaaaatcatgctataaatttcaataattttcatcagttt
acatcaaaaacaccttctttaaaattaataggatttaatgaaagtagtataaaagtaaag
tcttataatttatcaaatttagcgagttatgatgaaattcgtgattttccttttatcgat
aaaacatcgtatttgtcgccttatttccgcttcggattggtaagtgttcgtaaaatggtg
caatttgctttaaaaaccaatgcgacttttttaaacgaactgatttggcgagaatttttt
atgcaagtattatttcattttcccaaagtggttaccaataatttcaagcaaaaatacgat
gccattccgtggagaaataaccaagcagaatttgaaaaatggtgtaaaggcgaaacaggt
tatccgatggttgatgcaggcatgcgacagttaaataaaacggggtatatgcacaacaga
gtacgtatgattacggcaggttttttatgtaaacatctgttaattgattggcgttggggc
gaagcgtattttgctcaaaaactattagattacgaattatcagcaaacaacggaaattgg
caatgggcagcaggaacgggttgtgatgctgcgccatattttagagtttttaatcctgaa
gcacaattaaaaaagttcgataaagacttacaatacattcgaaaatggattgaaaatttt
gatgaattaaactatccacagccaatggttgaacataaatttgccagagaaagagcaatt
tcgacttataaagaagccttaaattaa
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