Tenacibaculum finnmarkense: PJJ26_02935
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Entry
PJJ26_02935 CDS
T08880
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tfi
Tenacibaculum finnmarkense
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfi03016
]
PJJ26_02935
Enzymes [BR:
tfi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PJJ26_02935
Transfer RNA biogenesis [BR:
tfi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PJJ26_02935
Prokaryotic type
PJJ26_02935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
WCC42816
LinkDB
All DBs
Position
507464..508252
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AA seq
262 aa
AA seq
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MNYKNTYLVTIQYLGFRFHGWQKQPNLKTGHLFLDKTLKFIFKGIRLKSLGVGRTDARVS
ATHFAFQLFIDQTVDFEQFMIDFNANAPGDMRALKIEDIDKKFNIIQHPKIKEYRYYFSY
GEKNHPYAAPFLTRFRDQLDLEIMKEGAQLFEGFHNFKRYCTKPSEETKVERSIEYCRIE
KNTELTASFFPKESFVLIVRGEGFLRNQIRLIMGGLHSLGKGEYGLDFIKDSLNPESDIE
FIKNIAPASGLHLHKLEFKDLD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaattataaaaacacgtatttagttaccattcagtatttaggatttcgttttcatgga
tggcaaaaacagccaaatttaaaaacaggtcatttatttttagataaaacgttaaaattt
atttttaaaggaatccgcttaaaaagtttgggtgtcggtagaaccgatgccagagtatcg
gctactcattttgcgtttcagttatttattgatcaaaccgtagatttcgagcaatttatg
attgattttaatgccaatgctccaggcgatatgcgggcattaaaaattgaagatatcgat
aaaaaattcaatataattcagcatccgaagataaaagaatatcgttattatttttcttat
ggtgaaaaaaatcatccgtatgccgcaccttttttaacccgatttagagatcagttagat
ttggaaattatgaaagaaggcgctcaattatttgaaggttttcataattttaaaagatat
tgtacaaaaccatcggaagaaactaaggtggaaagaagtattgaatattgtcgcattgaa
aaaaacacggaattaacagcttctttttttccaaaagagagttttgtattaattgttaga
ggcgaaggttttttaagaaaccaaatccgtttaataatgggcggattacacagtttagga
aaaggggaatacggtttagattttataaaagacagtttaaaccctgaatcagatattgaa
tttattaaaaatatcgcgcctgcttcaggattgcatttacataaattagaatttaaagat
ttggattaa
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