Tenacibaculum finnmarkense: PJJ26_05230
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Entry
PJJ26_05230 CDS
T08880
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tfi
Tenacibaculum finnmarkense
Pathway
tfi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PJJ26_05230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfi02000
]
PJJ26_05230
Enzymes [BR:
tfi01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PJJ26_05230
Transporters [BR:
tfi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PJJ26_05230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
ABC_ATPase
AAA_22
nSTAND3
AAA_29
AAA_16
AAA_24
APS_kinase
ABC_membrane_2
NACHT
ATP-synt_ab
MMR_HSR1
AAA_25
AAA_5
DEAD
NB-ARC
DUF87
AAA_30
AAA_28
AAA_33
AAA_18
DUF3159
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
WCC43227
LinkDB
All DBs
Position
complement(1012608..1014437)
Genome browser
AA seq
609 aa
AA seq
DB search
MGYFKDILKYEKKYRKFTVLNIVFNILYAIFNVLSVLAFIPVLGILFGTDKKIINEPNYE
GISKIGDFLKDSFYHFISEKIKTEGDINTLVFICLLALSLFFLKNLFRYLASYVIAFLRT
GIVKDLRDKLYDKIVELPISYFSEKRKGDIIARMTSDVQEVEGSIISSIETIVREPLTVI
ISISIMLFMSLKLTLFVFVLLPVSGVIISSISKKLKANSAKAQKETGNFLSFIEETLTGL
RIIKGFNAQGVIATKFNNSTSNFKQLTTSVFHRKSLASPMSEFLGSATIIAILWYGGTEV
LSKTSALQPDEFFGYIVLFYTVLNPIKLITSTFYNIQKGEASAERIMTVLNTENTIKDKS
NATIKETFKNKIEFKNISFKYKDDYVLKDFTLTINKGETVALVGQSGSGKSTLANLITRF
YDVNKGEVVIDDDNIRDITKKSLRNLMGIVSQDSILFNDTITNNLKLGSQNANDTAVLEA
AKIANADEFIQNLPEKYNTNIGDSGNTLSGGQKQRLSIARAVLKNPPIMILDEATSALDT
ESEQLVQVALEKMMQNRTSLVIAHRLSTIQNADKIVVMKKGAIVEQGKHNELLAKKGEYY
KLVTMQSLT
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggatattttaaagatatattaaaatatgaaaaaaagtatcgaaaatttacagttcta
aatattgtatttaatatactttacgcaatttttaatgtgctatcagttttagcttttatc
cctgttttagggattctatttggtactgataaaaaaattataaatgaaccaaactatgaa
ggtattagtaaaattggtgattttctaaaagatagtttttatcattttatatcagaaaaa
ataaaaacagaaggtgacataaatacacttgtatttatttgcttattagcactttcatta
ttttttctaaaaaacttatttagatatttagcgtcttatgttattgcttttttaagaaca
ggtattgtaaaagacctacgagataaactctacgataaaattgttgagttaccgatttct
tatttttccgaaaaaagaaaaggagacatcatagcacgtatgacttctgatgtacaagag
gtagaaggttctattatatcatcaatagaaaccattgttagagaacctttaacagttata
atatctatctctatcatgctttttatgagtttaaaactcaccttatttgtttttgtttta
ctacctgtttctggtgttataatatcatctataagtaaaaaactaaaagcaaattcagca
aaagcacaaaaagaaactggtaattttttatcttttattgaagaaacattaaccggctta
agaataattaagggttttaatgctcaaggtgtaattgcaacaaaattcaataactctaca
agtaattttaaacaattaacgacaagtgtttttcataggaaatcattagcttcacctatg
agtgagtttttaggttctgcaaccattattgccattctttggtacggaggaaccgaagtt
ctatctaaaacaagtgcactacaaccagatgagttttttggctatattgtgctgttttac
accgttttaaaccctataaaattaataacatcaacgttttataatatccaaaaaggtgaa
gcttctgcagaaagaattatgacggtcttaaatacagaaaacactattaaagacaaatca
aatgcaaccataaaagagacctttaaaaataaaattgaatttaaaaacatttcttttaaa
tataaagatgattatgttttaaaagattttacattaactattaataaaggcgaaactgtt
gctttggttgggcagtctgggagtggaaaatctactttagcaaaccttattactcgtttt
tatgatgtaaacaaaggagaggtggtaattgatgatgacaatattagagacatcaccaaa
aaatctttaagaaatttgatgggaattgtctcacaagattctattttatttaatgacact
atcacaaacaatcttaagttagggtcacaaaatgccaatgacactgctgttttagaagct
gcaaaaattgcaaatgctgatgaatttattcaaaatttaccagaaaaatataatacaaat
attggtgacagtggaaacacgctttctggagggcaaaaacaacgtttatctattgcaaga
gctgttttaaagaatccaccaattatgattttagatgaagcaacctcagctttagatacc
gaatcggaacaattagtgcaagttgctttagaaaaaatgatgcaaaatagaacttcttta
gttattgcacatagattatcgaccattcaaaatgccgataaaattgttgtaatgaaaaaa
ggcgcaattgttgagcaaggtaaacataacgaattacttgctaaaaaaggcgagtattat
aaattggttaccatgcagtctttaacgtaa
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