KEGG   Tenacibaculum finnmarkense: PJJ26_05555
Entry
PJJ26_05555       CDS       T08880                                 
Name
(GenBank) type I restriction endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tfi  Tenacibaculum finnmarkense
Brite
KEGG Orthology (KO) [BR:tfi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tfi02048]
    PJJ26_05555
Enzymes [BR:tfi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PJJ26_05555
Prokaryotic defense system [BR:tfi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PJJ26_05555
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD DUF3801 DUF4144
Other DBs
NCBI-ProteinID: WCC43290
LinkDB
Position
complement(1103108..1106173)
AA seq 1021 aa
MQSKTNEQALESAIEKILTGTCLEDIKVDGKNINSVNEYAEIYRTGKGYYIGQASNFNAR
FAIDEQFFWEFLENTQKEELEKIQRQNDWKLKILNRFDRLVKKYGILYLLKKGLQVDNAN
FTLFYQLPLASSSQTIKDRFEQNKFSITRQLRYSIDNPREEIDLVLFINGLPIVTMELKN
AWTGQNARVHGQHQYKTQRDTKQPLLNFARCMVHFAVDTDEAYMTTKLNDKNTFFLPFNK
GNNHGKGNPEVPKGEIGHRTNYLWNEIFTRKSLANIIQHFVRLDGKLKDPLQGKTLFFPR
YQQLDVVRKIVADASVKGVGQTYLIQHSAGSGKSNSITWAAYQLIETYPENENTPGNKGV
EHPLFDSVIVVTDRRLLDKQIRENIASFSEIKNIIAPAYSSKELRESLEQGKKIIITTIQ
KFPFIIDGIADLSDKHFAVIIDEAHSSQSGSAHDSMNTAMGQQVNEDDKLDAQDKIVQAM
QARKMRGNASYLAFTATPKPITLEKFGEKQEDGTFNAFHLYSMKQAIEEGFILDVLSNYT
TLKSYYEIEKSIEDNPLFDSSKAQKKLRSYVEQHQQTINTKAEIILDHFIPKIVNQKKLK
GKAKAMVITQSIESAIRYYKALQNILKDKGNPFKIVIAFSGTKEVDGIEYTEAEMNGFAE
KDTKDKFDEDAYRILVVANKYLTGFDQPKLCAMYVDKKLQGVLAVQALSRLNRSANKLGK
KTEDLFVLDFFNSTADIKTSFDPFYTATTLSEATDVNVLHELKEVLDDVAVYEWHEVEDF
NEKFFNKEDAQVLSPIIERAAERFSNELDLEDDEKADFKIKAKQFVKIYGQMASIIDFEI
IVWEKLYWFLKFLIPKLPIKPEGIDGLDELLESVDLSTYGLERVRLNESIGLDDSESTID
PQNPNPRGAHGSDEEKDPLDLIIKSFNERWFDSFGETAEERKLKLINYNKSIQAHPDFEA
KVVNNNDSQNSDLALKKIIDEVMSSKRKQELEVYKLYAKDETFYRSFFDTMKRLSSIGNS
I
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgcaatcaaaaactaacgaacaagcattagaatctgctatagaaaaaatattaacagga
acttgtttagaagatattaaagtagacggtaaaaatataaattctgtaaatgaatatgcg
gaaatttaccgcacaggaaaaggttattatattggacaagcatctaattttaacgcacgt
tttgctattgatgagcagtttttttgggagtttttagaaaacacgcaaaaagaagaatta
gagaaaattcaaagacaaaacgattggaaattaaaaatactcaatcgttttgatcgattg
gttaaaaaatacggtattctatatcttttaaagaaaggcttacaagtagataatgctaat
tttaccttattctatcagttgcctttagcaagtagtagccaaacgataaaagacaggttt
gaacaaaataaatttagtattaccagacaattacgctattctattgacaatcctagagaa
gaaatagatttggtattgttcatcaatggtttgcctattgttacgatggagcttaaaaat
gcttggacagggcaaaatgcaagggttcatgggcaacatcaatacaaaacgcaacgtgat
actaaacaacccttgttaaattttgcacgttgtatggttcattttgcagtagatactgac
gaagcttatatgaccacaaaattaaatgataaaaacaccttctttttaccatttaacaaa
ggaaataaccatggaaaaggcaacccagaagtaccaaaaggagaaattggacatcgaaca
aattatttatggaatgaaatatttacccgtaaaagtttagccaatattattcagcatttt
gtgcgtttagatggaaaactaaaagatccattacaaggtaaaaccttgttttttccaaga
taccaacaattggatgtagttcgtaaaatagtagcagatgcaagtgtaaaaggtgttggg
cagacctatttaattcaacattcggcaggttctggaaaatcaaattcaattacatgggca
gcgtatcaattaatagaaacctaccctgaaaacgaaaatacaccaggaaataaaggcgta
gaacatcctttatttgattcggttattgttgttaccgatcgtagattgttagacaaacaa
atacgagaaaatattgctagtttctcagaaataaaaaacattattgcccccgcctactct
tctaaagaattaagagaaagcttagagcaaggcaaaaaaataattataactaccattcaa
aaattcccatttattattgatggcattgcagatttaagtgacaaacattttgctgttatt
attgatgaagcacacagtagccaaagcggttctgcacacgatagtatgaatactgctatg
ggacaacaagtaaatgaagatgataaattagatgcacaagataaaattgtacaagcgatg
caggcacgtaaaatgcgtggaaatgcttcttatttagcttttacagcaacaccaaaaccg
attactttagaaaaatttggagaaaaacaagaagatggtacttttaatgcttttcattta
tattctatgaaacaagccattgaagaaggttttattttagatgttttatcgaattatacg
acactgaaaagttattatgaaatagaaaaatctattgaagataatccattgtttgattct
tcaaaagcacagaaaaaattacgttcttatgtagaacaacatcaacaaactatcaatacg
aaagccgaaattatactcgaccattttattccgaaaatagtaaatcaaaaaaagctaaaa
ggaaaagcaaaagcgatggttattacacaaagtatagaatctgctattcgctattataaa
gcacttcaaaatattttaaaagataaaggaaatccgtttaaaatagttattgcattttcg
ggaactaaagaagtagatggtattgaatataccgaagccgaaatgaatggttttgcagaa
aaagatacgaaagataaatttgatgaagatgcttatcgaatattagtggtcgctaacaaa
tacctaacaggatttgatcaaccaaaattgtgtgctatgtatgtagataaaaaactacaa
ggagtattagcagtacaagcactatcacgtttaaataggtctgcaaataaattaggaaag
aaaacagaagatttatttgtgttagattttttcaattcaacagcagatataaaaacctct
tttgatcctttttacacagcaacaacattaagtgaagctacagatgtaaatgtattgcat
gaattaaaagaagtactagacgatgtagccgtttatgaatggcatgaagtagaagatttt
aatgaaaagttttttaataaagaagatgcacaggtattaagcccaattattgaaagagca
gcagaacgttttagtaatgaacttgatttagaagatgatgaaaaagcagattttaaaatt
aaagcaaagcagtttgtaaaaatttacgggcagatggcttctattatagattttgaaatt
attgtttgggaaaaattatattggtttttaaagtttttaataccaaaactacctataaaa
cctgaaggaatagatggtttagatgaattattagaatctgtagatttatcaacttatgga
ttagaacgtgtacgcttaaatgaatctattggattagatgatagtgagagtactattgat
cctcaaaacccaaatccaagaggagcacatggttcggacgaagaaaaagatcctttagat
ttaattataaaaagttttaacgagcgttggtttgatagttttggagaaacagcagaagaa
agaaaattaaaattaataaattataataaatctattcaagcacatccagattttgaagct
aaagttgttaataataatgatagccaaaatagtgacctagctctaaaaaaaattatagac
gaagtaatgagttctaaaagaaaacaggaattagaggtttacaaattgtatgcaaaagat
gaaactttctatagatcatttttcgatacaatgaagcgactttctagtattggtaactct
atttag

DBGET integrated database retrieval system