Tenacibaculum finnmarkense: PJJ26_05875
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Entry
PJJ26_05875 CDS
T08880
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tfi
Tenacibaculum finnmarkense
Pathway
tfi00300
Lysine biosynthesis
tfi00470
D-Amino acid metabolism
tfi01100
Metabolic pathways
tfi01110
Biosynthesis of secondary metabolites
tfi01120
Microbial metabolism in diverse environments
tfi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PJJ26_05875 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PJJ26_05875 (lysA)
Enzymes [BR:
tfi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PJJ26_05875 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WCC43351
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All DBs
Position
complement(1200715..1201923)
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AA seq
402 aa
AA seq
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MNREALLNLANKYGSPLYVYDTEKIINQYKNITTAFSKVKNLKINYAVKALSNINILKVF
KTLNSGLDTVSIQEVKLGLLAGFSPKDIIYTPNGVSLQEIEEVSKLGIQINIDNLSILEL
FGQKHPKTPVCIRINPHIMAGGNSNISVGHIDSKFGISIHQVPHIKRVVENTGMRINGIH
MHTGSDILDIDTFIRASDILFDVARQFKNIDFIDFGSGFKVPYKSDDISTDIVELGEKLS
DRFNKFCKNYGKNITLMFEPGKFLVSESGKFLAKVNVIKQTTSTVFAGIDSGMNHLIRPM
LYNSYHTIENLSNPKGRERFYSIVGYICETDTFGSNRRINEISEEDILCFSNAGAYCYSM
ASNYNSRFKPAEVMIYKAKDYLIRKRETIDDILRNQENIKID
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagaagcattattaaatttagcaaacaaatacggttcgccgctttatgtatat
gatactgaaaaaataataaatcagtataaaaatataaccactgctttctctaaggttaaa
aacttaaaaataaactacgctgtaaaagcactttctaacatcaatattttaaaggttttt
aaaaccttaaatagcggtttagataccgtttctattcaagaagtaaaactcggtttactt
gccggattttctcctaaagatattatttatacaccaaatggggtttctttacaagaaatt
gaagaagtttcaaaattaggaattcaaattaatattgataatttatctatcttagagttg
tttgggcaaaaacacccgaaaactcctgtttgtattcgtataaatccgcatattatggca
ggtggaaatagtaatatttctgttgggcatatcgattctaaatttgggatttcaattcat
caagtaccgcatataaaaagagttgttgaaaatacaggcatgcgtattaacggtattcac
atgcacacaggttctgatattttagatatcgatacttttattagagcttcagatatttta
tttgatgttgctcgacaatttaaaaatattgattttattgatttcggaagtggatttaaa
gttccttacaaatctgatgatatttctactgatattgttgaattaggtgaaaaattatct
gatagatttaacaaattctgtaaaaattacggtaaaaatattaccctaatgtttgagcct
ggaaagtttttagtaagtgaatcaggaaagtttttagcaaaagttaatgtaattaagcaa
acaacctcaactgtttttgcaggaattgatagcggaatgaatcatttaattcgtccgatg
ctttacaattcgtaccatactattgaaaacttatctaacccaaaaggaagagaacgtttt
tatagcattgtcggttatatttgtgaaacagataccttcggttctaacagacgtattaat
gaaatatcagaagaagatattttatgttttagcaatgcaggtgcttactgctactcgatg
gcatcaaattacaattcaaggtttaagcctgccgaagtaatgatttacaaagcaaaagat
tacttaattagaaaaagagaaactatagatgatattcttagaaatcaagaaaacattaaa
attgattaa
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