Tenacibaculum finnmarkense: PJJ26_06355
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Entry
PJJ26_06355 CDS
T08880
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
tfi
Tenacibaculum finnmarkense
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfi03000
]
PJJ26_06355
Transcription factors [BR:
tfi03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PJJ26_06355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR_2
MarR
NirdL-like_HTH
HTH_11
AsnC_trans_reg2
Mga
HTH_41
M3K_C
HTH_IclR
HTH_34
HTH_5
HTH_Mga
TrmB
Motif
Other DBs
NCBI-ProteinID:
WCC43431
LinkDB
All DBs
Position
complement(1312000..1312479)
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AA seq
159 aa
AA seq
DB search
MKKFVLDEIDHQILDILIENARTPFTDIAKKLLVSAGTIHVRVKKMEDEGIIQGSTLSLN
YDKMGYTFIAHVGVYLEKSSMTQHVLENLRLIPNVTVAYVTAGKYNIFCKVRAKSTNDAK
DIIYRIDDINGVNRTETMISLEESINDKKRLMHAIFQDI
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttgtactagatgaaattgatcatcaaattttagacattttaatcgaaaat
gcccgaacaccttttaccgacattgcaaagaaattattagtatcggctggtactattcat
gtacgtgttaagaaaatggaagacgaaggcattattcaaggttcaacattatccttgaat
tacgataaaatgggatacaccttcatcgcacatgttggagtatatttagagaagtcgtct
atgacgcaacacgttttagaaaatttacgcttaataccgaacgtaacagttgcttatgta
actgcgggtaaatacaatatcttttgtaaggtaagagctaaaagcacgaatgatgctaaa
gatattatctacagaatagatgatattaatggggttaatcgtacggaaacaatgatttct
ctagaagaaagtattaatgacaaaaaacgtttaatgcacgctatttttcaagacatttaa
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