Tenacibaculum finnmarkense: PJJ26_06380
Help
Entry
PJJ26_06380 CDS
T08880
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
tfi
Tenacibaculum finnmarkense
Pathway
tfi03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PJJ26_06380 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tfi03011
]
PJJ26_06380 (rpsA)
Ribosome [BR:
tfi03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PJJ26_06380 (rpsA)
Bacteria
PJJ26_06380 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
WCC43436
LinkDB
All DBs
Position
complement(1317910..1319685)
Genome browser
AA seq
591 aa
AA seq
DB search
MSEEKNTAAEAVTVNPAEFLATFNWHKYEEGIDEVDESKLKEFEKALEGTVGFVNERDVI
EGTVTRITDRDAIIDINSKSEGVISLNEFRYNPGLKLGDSVEVLVDKREDASGQLVLSHK
KARVIKAWERVNNAHETGEIVNGFVKCRTRGGMIVDVFGIEAFLPGSQIDVKPIRDYDQY
VEKTMEFKVVKINHEFKNVVVSHKALIEADLEDQKKEIIGQLEKGQVLEGVVKNITSYGV
FVDLGGVDGLVHITDLSWSRINHPNEVVELDQKLNVVILDFDDNKSRIQLGLKQLSSHPW
EALNTDLKVGDKVKGKVVVLADYGAFVEVEEGVEGLIHVSEMSWSTHLRSAQDFVKVGDE
VEAQILTLDREDRKMSLGMKQLHPDPWTDITTKYPVNSKHTGTVRNYTNFGVFVELEEGI
DGLVYISDLSWTKKIKHPSDFVTVGDKLEVQVLELDVENRKLNLGHKQTQDNPWDAHEAT
YAIGSTHEGSIKEKNDKGATVLFSDGIEAFAPTRFLEKEDGSKLEKGDAVKFIVTEFSKE
YRRIVVSHTSLFKEEEKKNIKAAAKKAADVEKTTLGDIGGLAELKRKMEGK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaaaaaacacagctgctgaggcagtaacagtaaacccagcagaattttta
gcaacatttaactggcataaatacgaagaaggtattgatgaagttgatgaatctaaatta
aaagaattcgaaaaagcgttagaaggaacagtaggtttcgtaaacgaacgtgatgttatc
gaaggaaccgttacaagaattactgatagagatgcaattatcgatatcaactctaaatct
gaaggagttatttctttaaacgaattccgttacaatccaggtttaaaacttggagatagt
gttgaggtattagttgacaaaagagaagatgcttctggtcaattagtattatctcacaaa
aaagcacgtgttattaaagcatgggaacgtgttaataatgcacatgaaactggtgaaatc
gttaacggttttgttaagtgtagaactcgtggaggtatgatcgttgatgtattcggtatt
gaagctttcttaccaggatctcaaattgatgtgaagcctatccgtgattacgatcagtat
gtagagaaaactatggaattcaaagttgtgaaaatcaaccacgaatttaaaaacgtagta
gtatcgcataaagcgttaattgaagctgatttagaagatcagaagaaagaaatcatcggt
caattagaaaaaggacaagtattagaaggtgttgttaaaaacattacttcttatggtgtc
tttgttgatttaggtggtgttgacggtttagttcatattactgatttatcttggtctcgt
attaaccacccgaatgaggttgttgaattagatcagaaattaaatgttgtaattttagac
tttgacgataacaaatctagaattcaattaggtttaaaacaattatcttctcatccttgg
gaagctttaaatactgatttaaaagttggtgataaagtgaaaggaaaagttgttgtttta
gctgattatggtgcttttgtagaggttgaagaaggtgttgaaggtttaattcacgtttct
gaaatgtcttggtctactcacttacgttctgcgcaagatttcgtaaaagttggtgatgag
gttgaagctcaaattttaactttagaccgtgaagaccgtaaaatgtctcttggtatgaag
caattacatccagatccttggactgatattactactaagtaccctgtaaactctaagcat
actggtactgtacgtaactatactaactttggtgtgtttgttgaattagaagaaggaatt
gacggattagtttatatctctgatttatcttggactaagaaaattaagcatccttctgat
tttgttactgttggtgataaattagaagttcaagttttagaattagacgttgagaaccgt
aagttaaacttaggtcataagcaaactcaagataacccttgggatgctcatgaagctacg
tatgcaatcggatctactcacgaaggttctatcaaggaaaagaatgataaaggtgcaact
gtacttttctctgacggaatcgaagctttcgctccaactcgtttcttagaaaaagaagac
ggttctaaattagaaaaaggtgatgctgtaaagttcatcgttactgaatttagtaaagaa
tacagaagaattgttgtttctcatacttctcttttcaaagaagaagaaaagaaaaacatc
aaggctgctgctaaaaaagctgctgacgtagaaaaaactactttaggagatattggtgga
ttagctgaattaaaaagaaaaatggaagggaaataa
DBGET
integrated database retrieval system
