Tenacibaculum finnmarkense: PJJ26_06905
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Entry
PJJ26_06905 CDS
T08880
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tfi
Tenacibaculum finnmarkense
Pathway
tfi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PJJ26_06905
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfi01007
]
PJJ26_06905
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfi03016
]
PJJ26_06905
Enzymes [BR:
tfi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PJJ26_06905
Amino acid related enzymes [BR:
tfi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PJJ26_06905
Transfer RNA biogenesis [BR:
tfi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PJJ26_06905
Prokaryotic type
PJJ26_06905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
DUF5915
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
WCC43529
LinkDB
All DBs
Position
complement(1449863..1452499)
Genome browser
AA seq
878 aa
AA seq
DB search
MNIPSKYDSKEVEGKWYDYWMKHNYFHSEVDDREPYTIVIPPPNVTGVLHMGHMLNNTIQ
DVLIRRARLQGKNACWVPGTDHASIATEAKVVAKLKEQGIDKNDLTREEFLAHAWEWKNE
YGGIILEQLKKIGASCDWERTSFTMDPEMSESVIKVFVDLYNKGLIYRGYRMVNWDPEAK
TTLSDEEVIHVEKQGNLYYLEYKIEGSDEKLTIATTRPETIFGDAAICINPNDERFTHLK
GKKAIVPLCNRVIPIIEDEYVDVEFGTGCLKVTPAHDQNDKVLGEKHKLEVIDIFNEDAS
LNSFGLHYQGKDRFVARKLVAKELEENGVLVKTEVHMNKVGTSERTKAVIEPRLSDQWFL
KMEDLAKPAIEAVLGEDSEVKLYPKKFENTYRHWMENIRDWNISRQLWWGQQIPAYFYGD
GKEDFVVANSIEEAVVLAKERTGKADLVATDLKQDEDALDTWFSSWLWPMSVFDGINNPE
NEEIKYYYPTNDLVTGPDILFFWVARMIVAGYEYKDEKPFENVYLTGLVRDKQRRKMSKS
LGNSPDALKLIEDYSADGVRVGLLLSSAAGNDLMFDEDLCKQGKGFSNKIWNAFRLVTGW
EIDATIEQPESAKIGLEWYNAKFQTVLAEIEDHFSKYRLSDALMAIYKLIMDDFSSWLLE
AVKPAYQQPIDKKTFDAVIAIFEDNLKVLHPFMPFLSEEIWQHITDRTPEEALIIAKYPE
LKKVDTAIIGEFEFATDVVSGIRTIRKNKNISFKDAVELSVVNNENFTNKFDVLIEKLTN
ASTINYVSEKVDGASFRVKSNEYFIPVAEEEIDVEAETIKLNAELKRAEGFLFGIQKKLS
NERFVSNAPDQVIVIERKKESDTLAKIETIKSSLASLK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaatattccatcaaaatacgattctaaagaagtagaaggaaagtggtacgattactgg
atgaaacataattattttcattctgaagtagatgatcgtgaaccttacaccattgtaata
ccaccacctaatgtaacaggagtattgcatatggggcacatgttaaacaacacaattcag
gatgttttaatccgtcgtgcgcgtttacaagggaaaaatgcgtgttgggttcctggaacc
gatcacgcctcaattgctaccgaagcaaaagtggtagcaaaattaaaagaacaaggaatc
gataaaaatgacttaactcgtgaagaattcttagcgcatgcttgggaatggaaaaatgag
tatggaggaatcattttagagcaacttaaaaaaatcggtgcttcttgcgattgggaacgt
acctcttttacgatggatcctgaaatgtcggaatctgtaataaaagtttttgttgattta
tataataaaggactaatttaccgtggttatagaatggtaaattgggatcctgaagcaaaa
acaacgttatctgatgaagaggttattcatgttgaaaaacaaggaaatctttattattta
gaatataaaattgaaggttctgacgaaaaattaactattgcaaccacacgtcctgaaact
atttttggagatgctgcaatttgtatcaacccgaatgatgagcgttttacgcatttaaaa
ggtaaaaaagcaattgtacctttatgtaatagagttattcctattattgaagatgaatat
gtcgatgttgaatttggaacaggatgtttaaaagtaacgcctgcacacgatcaaaatgat
aaagttttaggtgaaaagcataaattagaagtaattgatatttttaacgaggatgcttct
ttaaattctttcggattacattatcaaggaaaagatcgttttgtagcgcgtaaattagtc
gctaaagaattagaagaaaatggtgttttagtgaaaacggaagtccacatgaataaagta
ggaacttcggaaagaactaaagctgttattgaaccaagattgtcagatcaatggttttta
aagatggaagatttagcaaaacctgctattgaggctgttttaggtgaagatagcgaggtt
aaattatatccaaagaaatttgaaaacacgtaccgtcattggatggaaaacatccgtgat
tggaatatttcgcgtcaattatggtggggacaacaaattcctgcgtatttctatggcgat
ggaaaagaagattttgtggtagcaaatagcatcgaagaagcggttgttttagcaaaagaa
agaactggaaaagctgatttagttgcaaccgatttaaaacaagatgaagatgccttagac
acttggttttcttcttggttatggccaatgtctgtttttgatggaattaataatcctgaa
aatgaagaaatcaaatattattatccaacaaacgatttagttacaggaccagatatttta
tttttctgggtagctcgtatgattgttgcaggatacgaatataaagatgaaaagcctttt
gagaacgtttatttaacaggtttggtacgtgataaacaacgtagaaaaatgtctaaatcg
ttagggaattcacctgatgctttaaaattaattgaagattatagtgccgatggtgttcgt
gtaggattattattaagttctgctgcggggaacgatttaatgttcgatgaagatttatgt
aagcaaggaaaagggttttcaaacaaaatttggaatgcttttcgtttagttacaggttgg
gaaattgatgcaactattgaacagcctgaatcagcaaaaattggtttagaatggtataat
gcaaagtttcaaactgtgttagctgaaattgaagatcatttttctaaatatcgtttatcg
gatgctttaatggcaatttataaactaattatggatgatttttcttcatggttattagaa
gctgtaaaaccagcatatcagcaaccaattgacaagaaaacatttgatgcggtaattgct
atttttgaagataatttaaaagtattacatccgtttatgcctttcttatccgaagaaatt
tggcaacatattactgacagaacgccagaagaagcgttaattattgcgaaatatcctgaa
cttaaaaaagtagataccgcaattattggtgaattcgaatttgctacggatgttgtatca
ggaattagaactatcagaaaaaataaaaacatttcatttaaagacgctgttgaattatca
gtggtaaataatgaaaatttcaccaataaatttgatgttttaattgaaaaattaaccaac
gcatcaacaattaactatgtttctgaaaaagttgacggagcttcgtttagggtaaaatcg
aacgaatattttattcctgttgctgaagaagaaattgatgtagaggcagaaaccattaag
ttaaatgctgaattaaaaagagcagaaggtttcttattcggaattcaaaagaaattatca
aatgagcgttttgtaagcaatgcaccagatcaggtaattgttattgaacgtaaaaaagaa
tcagatactttagcgaagattgaaactattaaaagtagtttagcttctttaaaataa
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