Tenacibaculum finnmarkense: PJJ26_07460
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Entry
PJJ26_07460 CDS
T08880
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tfi
Tenacibaculum finnmarkense
Pathway
tfi03030
DNA replication
tfi03430
Mismatch repair
tfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PJJ26_07460
03430 Mismatch repair
PJJ26_07460
03440 Homologous recombination
PJJ26_07460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfi03032
]
PJJ26_07460
03400 DNA repair and recombination proteins [BR:
tfi03400
]
PJJ26_07460
Enzymes [BR:
tfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PJJ26_07460
DNA replication proteins [BR:
tfi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PJJ26_07460
DNA repair and recombination proteins [BR:
tfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PJJ26_07460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WCC41332
LinkDB
All DBs
Position
1605643..1606737
Genome browser
AA seq
364 aa
AA seq
DB search
MYAILDIETTGGKFNEEGITEIAIHKFDGHQVVDQFISLVNPEREIQEFVVKLTGINSNM
LRNAPKFYEVAKRILEITEDCIIIAHNASFDYRILRTEFDRLGYDYQRNTLCTVALSKKL
IPEAPSHSLGKLCRFIGIPMSDRHRANGDALATIQLFKLLLEKDTDKSIIQKSIKYADNR
HVKQRYLKILDKLPEKEGLFYVHSEQGVIIFIGRGKNIKHEVNKLLLKDSPKGLKIIKRI
HEITYQETGNLLFTRLKYHLELLKLKPKYNVIRKPKISTKNFNHDNLLVIDKGRTPEENA
VILIENNMVVGYTYTSLAFQENQLAILKPMLTPIENTELAKTIIKNYLLKNKVSKIVRLA
VENQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaattttagatattgaaaccacaggaggaaaatttaacgaagaaggtattaca
gaaattgccattcataaatttgacggtcatcaagttgttgaccagtttattagtttggtt
aatcctgaacgagaaatacaagagtttgttgttaaattaacagggattaacagcaatatg
cttcgcaatgctcctaaattttatgaggtagcaaaacgcattcttgaaattacagaagac
tgtattattatagcacacaacgcaagttttgattatcgaattttacgcacagaatttgac
cgcttaggctatgattaccaaagaaataccctttgtacggttgcccttagtaaaaagcta
attccggaagcgccttcacatagtttaggtaaattatgtcggtttatcggtattccaatg
agcgacagacatagagccaatggtgatgccttggcaaccatacaattgttcaaattgtta
ctagaaaaagacacggataaaagtattattcagaaatctataaaatatgccgataacagg
cacgtaaaacaacgttatttaaaaattttagataaattacccgaaaaagaagggcttttt
tatgtgcatagtgaacaaggtgttattatttttatcggtaggggtaaaaatataaaacat
gaagtaaataaacttcttttaaaagacagtcctaaagggctaaaaataataaaaagaata
cacgaaattacctatcaagaaacagggaatttactttttacccgcttaaaatatcattta
gaactgcttaaattaaaacctaagtataatgttatccgtaagccaaaaatttctactaaa
aactttaatcacgataatttattagtgattgataaaggaagaactcctgaagaaaatgcc
gttattttaattgaaaataatatggttgtaggctatacatataccagtttggcttttcaa
gaaaatcaattggctattttaaaacccatgctaacacctattgaaaatacggaattagcg
aaaacgattattaaaaattatttacttaaaaataaggtatcaaaaatagtacgattagcc
gttgaaaatcaataa
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