Tenacibaculum finnmarkense: PJJ26_10630
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Entry
PJJ26_10630 CDS
T08880
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tfi
Tenacibaculum finnmarkense
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfi03032
]
PJJ26_10630 (gyrA)
03400 DNA repair and recombination proteins [BR:
tfi03400
]
PJJ26_10630 (gyrA)
Enzymes [BR:
tfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PJJ26_10630 (gyrA)
DNA replication proteins [BR:
tfi03032
]
Prokaryotic type
DNA Topoisomerases
PJJ26_10630 (gyrA)
DNA repair and recombination proteins [BR:
tfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PJJ26_10630 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WCC41903
LinkDB
All DBs
Position
complement(2328525..2331065)
Genome browser
AA seq
846 aa
AA seq
DB search
MADGEKLIPINIEEQMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGMHELGIKATG
SYKKSARIVGEVLGKYHPHGDTSVYDSMVRMAQNWSVRYMMVDGQGNFGSVDGDSPAAMR
YTEVRMQKISEDMLADIEKDTVDHRLNFDDTLQEPTVLPTRIPNLLVNGASGIAVGMATN
MAPHNLTEVVNGTIAYIQNRDIEIDELMEHIKAPDFPTGGTIYGYEGVKDAFHTGRGRIV
MRAKTSFEEVKARECIVVTEIPYQVNKAEMIKKTAELVNDKKLEGIANIRDESDRNGMRI
VYILKRDAIPNIVLNKLYKYTQLQTSFSVNNIALVNGRPEQLNLKELIHYFVEHRHEVIV
RRTEFELKKAQARAHILEGLIIASDNIDEVIKIIRASKNGDQARESLIERFELTEIQAKA
IVEMRLRQLTGLEQDKLRGEFDEIMLTITDLKDILANEPRRYQIITDELIHIRDKYGDER
RSEIHYAGGDMRIEDMIPNSKVVVTISHAGYVKRTNLDEYKVQNRGGRGQKGATTRNEDF
LEHLFVGTNHQYMMFFTQKGKVFWMRVYEIPEGGKNTKGRAMQNLINIEPDDKVKAFLVT
EDLKDEEYINSRYVIMATKKGQVKKTSLEQYSRPRTNGINAITIKEGDELLEAKLTTGDS
QVMLALKSGKSIRFEEAKTRPMGRTASGVRGISLQHDKDEVIGMIAVNDMDSNILVVSEK
GYGKRSKLEDYRVTNRGGKGVKTLNISEKTGDLVAIKNVDDSNDLMIINKSGLTIRMAVE
DLRVMGRATQGVRLINIKENDSIAAVAKVMREEEVEQVEQEETEVQGEVASETGTEIENN
TNEDQE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggcgaaaagttgattccgatcaacattgaagagcaaatgaaatcagcgtat
atcgattattcgatgtcggttattgtatcaagagcattaccagatgtaagagatgggtta
aagccagttcatcgaagagttttattcggtatgcacgaactaggtataaaagcaacaggt
tcatataaaaaatctgcaagaattgtaggggaagtactaggtaagtatcacccacacggt
gatacttctgtatacgattctatggttcgtatggcacaaaactggagtgtgcgttatatg
atggttgatgggcaaggtaactttggttctgttgatggagattctccggcagcaatgcgt
tataccgaggtaagaatgcaaaaaatatccgaagatatgttggcggatattgaaaaagat
actgttgatcatcgtttaaattttgatgataccctacaagaaccaaccgtattaccaacc
cgtattcctaacttattagtaaacggagcgtcaggtattgcagtaggaatggcaaccaat
atggcaccacacaacttaacagaagttgtaaacggaacgattgcttatattcaaaataga
gacattgaaattgatgagttaatggaacacatcaaagcgcccgattttcctacaggagga
actatctacggctatgaaggtgttaaagatgcttttcatactggtagaggtcgtattgta
atgcgtgctaaaactagttttgaagaagtaaaagcaagagaatgtattgttgttactgaa
attccgtatcaggtgaacaaagcagaaatgattaaaaaaactgccgagttagttaatgat
aaaaaattagaaggaattgcgaatattcgtgatgaatctgacagaaacggaatgcgtatc
gtttatattttaaaacgtgatgcaattcctaatattgtattaaataaattatacaaatat
acccaattacaaacctcatttagtgtaaataatattgcacttgtaaatggtcgtcctgag
cagttaaacttaaaagaattaattcattattttgttgaacacagacacgaagtaattgtt
cgtagaactgagtttgaattaaagaaagcacaggcaagagcgcatattttagaaggatta
attattgcttcggataatatcgatgaggtaattaaaattattcgtgcctctaaaaatggt
gatcaagctcgtgagagtttaattgagcgttttgaattaacggaaattcaggcaaaagcc
atcgttgaaatgcgtttgcgtcaattaactggtttagagcaagacaaattacgtggtgag
tttgatgaaattatgttaacgatcactgatttaaaagatattttagccaatgagccaaga
cgttatcaaataattaccgatgaactaatccatattagagataaatatggagatgagcgt
cgttctgaaattcattatgctggtggcgatatgcgtatcgaagatatgataccaaactct
aaagtagtcgttactatttcgcatgcaggatatgtaaaacgtaccaatcttgatgaatat
aaagttcagaatagaggcggacgtgggcaaaaaggcgcaacgactcgtaatgaagatttc
ttagagcacctatttgtagggacaaatcatcagtatatgatgttttttactcaaaaagga
aaagtgttctggatgcgtgtgtatgaaatccccgaaggaggaaagaataccaaaggtaga
gcgatgcaaaacttaatcaacattgaacctgatgataaagtaaaagcatttttagttact
gaagacttaaaagatgaagagtacatcaacagtcgttacgtaattatggctactaaaaaa
ggtcaggttaaaaaaacttctttagaacagtattctcgtccaagaactaacggaattaat
gccattacaattaaagaaggtgatgagcttttagaagcaaaattaactactggtgatagt
caagtaatgttagctttaaaatcgggtaaatctatccgttttgaagaagctaaaacgcgt
ccgatgggaagaactgcatcaggagttcgtgggataagtttacagcatgataaagatgag
gtaataggaatgattgccgtaaatgacatggatagtaatatcttagttgtttctgaaaaa
ggatatggtaaacgatctaaattagaagattatcgtgtaacaaaccgtggtggaaaagga
gtgaaaactttaaatatatcagaaaaaacaggtgatttagttgcgattaaaaacgtagat
gattcaaatgatttaatgattattaacaaatcggggcttaccattcgtatggctgttgaa
gatttacgtgtaatgggacgtgcaacacaaggtgttcgtttaattaacatcaaagaaaat
gatagcattgccgcagtagcaaaagtaatgcgtgaagaagaggttgaacaggttgagcaa
gaagaaacggaagttcaaggcgaagtagcatctgaaactggcacggaaattgaaaacaac
acaaacgaagatcaagaataa
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