Tenacibaculum finnmarkense: PJJ26_11140
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Entry
PJJ26_11140 CDS
T08880
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tfi
Tenacibaculum finnmarkense
Pathway
tfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PJJ26_11140 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfi03019
]
PJJ26_11140 (groL)
03110 Chaperones and folding catalysts [BR:
tfi03110
]
PJJ26_11140 (groL)
03029 Mitochondrial biogenesis [BR:
tfi03029
]
PJJ26_11140 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfi04147
]
PJJ26_11140 (groL)
Enzymes [BR:
tfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PJJ26_11140 (groL)
Messenger RNA biogenesis [BR:
tfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PJJ26_11140 (groL)
Chaperones and folding catalysts [BR:
tfi03110
]
Heat shock proteins
HSP60 / Chaperonin
PJJ26_11140 (groL)
Mitochondrial biogenesis [BR:
tfi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PJJ26_11140 (groL)
Exosome [BR:
tfi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PJJ26_11140 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PJJ26_11140 (groL)
Exosomal proteins of breast cancer cells
PJJ26_11140 (groL)
Exosomal proteins of colorectal cancer cells
PJJ26_11140 (groL)
Exosomal proteins of bladder cancer cells
PJJ26_11140 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
NNH2
Motif
Other DBs
NCBI-ProteinID:
WCC41996
LinkDB
All DBs
Position
2440987..2442615
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDVDARNGLKRGVDALANAVKVTLGPKGRNVIISKAFGAPHVTKDGVTVAKEIE
LEDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVQEGLKNVAAGANPMDLKRGID
KAVKAITEDLAKQAKEVGDSSEKIQQVASISANNDKVIGDLIATAFGKVGKEGVITVEEA
KGMETYVDVVEGMQFDRGYLSPYFVTNADKMIATLENPYILLFDKKISNLQEILPILEPV
SQAGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFSLENATLDLLGTAETVTIDKDNTTVVNGAGDDTQIKARVNQVKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKKVLKAITTENLDETTGIQIVYKAIEAPLRTIVENAGGEGSVVINKVLEGKKGFGYDA
KSEAYVDMLEAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEDAAPMPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatgtagacgctcgtaacggtttaaaacgtggagttgat
gcattagcaaatgcagtaaaagtaactttaggtcctaaaggacgtaacgtaattatttct
aaagctttcggtgcgcctcacgttacaaaagatggtgttactgttgctaaagaaattgaa
ttagaggatcctttagaaaatatgggagctcaaatggtaaaagaagtagcctctaaaacc
aacgatttagctggtgatggaactacaactgctactgtattagcacaagctattgtacaa
gaaggtttaaaaaatgttgctgcgggtgcaaatccaatggatttaaaacgtggtattgat
aaagctgtaaaggctattactgaagatttagccaaacaagcgaaagaagttggtgattca
tcagaaaaaatacaacaagtagcttctatttctgctaataacgataaagttattggagat
ttaattgcaactgcttttggtaaagttggtaaagaaggggttattactgttgaagaagct
aaaggaatggaaacgtatgttgacgttgtggaaggtatgcaattcgatagaggttattta
tcgccttattttgttaccaatgctgataaaatgattgctactttagagaatccttatatc
ttattatttgataaaaagatttctaacttacaagaaattcttccaatattagagcctgtt
tctcaagctggaagacctttattaattattgctgaagatgttgacggacaagcattagct
actttagtggttaataaattacgtggtggtttaaaaattgctgctgtaaaagcgccaggt
tttggtgaccgtagaaaagcaatgttagaagatattgctattttaactggtggaactgtt
atttctgaagaaagaggtttttcattagaaaacgctactttagatttattaggtactgct
gaaacagttactattgataaagataatacgactgttgttaatggtgctggtgatgataca
caaattaaagcgcgtgtaaatcaagttaaagctcaaattgaaactactacttctgattac
gataaagaaaaattacaagaacgtttagcgaagttagctggtggtgttgcagttttatat
gttggtgctgcttctgaagtagaaatgaaagaaaagaaagaccgtgttgatgatgcttta
catgcaactcgtgcggctgtagaagaaggtattgttgccggtggtggtgttgctttagtt
cgtgctaaaaaggttttaaaagctattactactgaaaacttagacgaaactacaggtata
caaattgtttacaaagcaattgaagcacctttaagaaccattgttgaaaatgcaggtggt
gaaggatcagttgttattaacaaagttttagaaggtaaaaaaggatttggttatgatgct
aaatctgaagcttacgttgatatgcttgaagctggtattattgaccctaaaaaagtaact
cgtgttgctttagaaaacgcagcatcggttgcagggatgattttaactaccgaatgtgct
ttaattgatattaaagaagatgcggctcctatgcctccaatgggtggtggtatgccagga
atgatgtaa
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