Tenacibaculum finnmarkense: PJJ26_12370
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Entry
PJJ26_12370 CDS
T08880
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
tfi
Tenacibaculum finnmarkense
Pathway
tfi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PJJ26_12370 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfi01007
]
PJJ26_12370 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfi03016
]
PJJ26_12370 (aspS)
03029 Mitochondrial biogenesis [BR:
tfi03029
]
PJJ26_12370 (aspS)
Enzymes [BR:
tfi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PJJ26_12370 (aspS)
Amino acid related enzymes [BR:
tfi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PJJ26_12370 (aspS)
Transfer RNA biogenesis [BR:
tfi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PJJ26_12370 (aspS)
Prokaryotic type
Other AARSs
PJJ26_12370 (aspS)
Mitochondrial biogenesis [BR:
tfi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PJJ26_12370 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
WCC42216
LinkDB
All DBs
Position
2699944..2701698
Genome browser
AA seq
584 aa
AA seq
DB search
MYRTHTCGELTASHINTEVTLSGWVQKSRDKGFMIWVDLRDRYGITQLIFDEERTSNDLI
EQAKTLGREFVIQVTGTVIERESKNKNIATGEVEVLVTKLEILNQAKTPPFTIEDKTDGG
EDIRMKYRYLDIRRNPVKDSLIFRSKVSMEVRKYLSDQEFIEVETPYLIKSTPEGARDFL
VPSRMNAGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILNIFEGLTRHLLKEINNVEVDKFPRMLYDDAMRLYGNDKPDIRFAMEFGELNE
VTQHKDFGVFNNAELVVGFAVPGGNKFTRKEIDNIIKWVKRPQVGALGMIYARVNEDGTF
KSSVDKFYDQEDLAKWAEITGAKAGDLVCVLSGDTNKVRAQLSALRMELAERLGLRDPKV
FAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDPGAVKANAYDLVLNGNEI
GGGSIRIHDKETQAIMFKHLGFTEEQAKEQFGFLMDAFEYGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPAALNDAQLSELSIKLDLKE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaacacatacttgtggcgaattaacagcctcgcatattaatactgaagtaacc
ctttctggttgggtacaaaaatcacgtgataaaggttttatgatttgggtcgatttacga
gatcgttacggaattacgcaattaatttttgatgaagaacgtacttctaatgatttaatc
gaacaggcaaaaaccttagggcgtgaatttgtaattcaagttacaggtactgttattgaa
agagaatcgaaaaataaaaacatcgctactggtgaagttgaagtattggttactaaatta
gaaattttaaaccaagcaaaaacgccaccttttactattgaagataaaacagatggtggt
gaagatatcagaatgaaatatcgttatttagatattcgtcgtaatcctgtaaaagatagt
ttgattttcagatcaaaagtatctatggaagtgcgtaaatatttatctgaccaagaattt
atagaagttgaaactccttatttaatcaagtcaactcctgaaggagcgcgtgacttctta
gtgccttctcgaatgaacgcagggcaattttatgccttaccacaatcgcctcaaaccttc
aaacaactattaatggttggtggaatggataaatactttcaaattgtaaagtgttttaga
gatgaagatttacgtgccgaccgtcagccagaatttacacaaattgactgtgaaatggct
tttgttgagcaagaagatattttaaatatttttgaaggattaacccgtcatttattaaag
gaaatcaataatgttgaggtggataaattccctagaatgttatatgatgacgccatgcgt
ttatacggaaatgataaaccagatatccgtttcgcaatggaatttggcgagttaaacgaa
gttacacaacataaagattttggtgtttttaataatgctgaattagtggttggtttcgct
gttcctggaggaaataaattcacaagaaaagaaattgacaatattattaaatgggtaaaa
cgtcctcaagttggcgctttaggaatgatttatgctcgtgtaaacgaagatggaactttc
aaatcttctgtagataaattctacgatcaagaagatttagcgaaatgggcagaaattaca
ggtgcaaaagctggtgatttagtgtgtgtgttatccggagataccaataaagtaagagcc
caattatcggctttaagaatggaattagcagaacgcttaggtttaagagatcctaaagta
tttgctcctctttgggttatagatttcccattattagaattagacgaagaaactgggcat
tatcatgcaatgcaccacccgtttacatcgcctaaaccagggcaattagagttattagat
acagatcctggagcagttaaagcaaatgcgtacgatttagtgttaaacggaaatgaaatc
ggtggaggttctatcagaattcatgacaaagaaacacaagcgatcatgtttaaacattta
ggatttactgaagaacaagcaaaagagcagttcggtttcttaatggatgcttttgaatat
ggcgcaccaccacacggaggtttggctttcggattggatagattggttgctattttaggc
ggacaagaaacgattcgtgattttattgctttccctaaaaataactcaggacgtgatgta
atgattgacgctcctgctgctttaaatgatgcgcaattatcagaattaagtattaaatta
gacttgaaagagtaa
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